TOMM40L

 

Full name: translocase of outer mitochondrial membrane 40 like Alias Symbol: FLJ12770|TOMM40B
Type: protein-coding gene Cytoband: 1q23.3
Entrez ID: 84134 HGNC ID: HGNC:25756 Ensembl Gene: ENSG00000158882 OMIM ID: 
Drug and gene relationship at DGIdb

 

TOMM40L involved pathways:

KEGG pathway Description View
hsa05014Amyotrophic lateral sclerosis (ALS)

 

Expression of TOMM40L:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TOMM40L 84134 226059_at 0.5219 0.2842
GSE26886 TOMM40L 84134 226059_at 0.0011 0.9971
GSE45670 TOMM40L 84134 226059_at 0.3823 0.0024
GSE63941 TOMM40L 84134 226059_at -1.3602 0.0030
GSE77861 TOMM40L 84134 226059_at 0.0607 0.8038
GSE97050 TOMM40L 84134 A_23_P845 -0.0917 0.7344
SRP007169 TOMM40L 84134 RNAseq -0.0312 0.9347
SRP008496 TOMM40L 84134 RNAseq -0.0504 0.8888
SRP064894 TOMM40L 84134 RNAseq 0.3370 0.0969
SRP133303 TOMM40L 84134 RNAseq 0.1561 0.5380
SRP159526 TOMM40L 84134 RNAseq 0.3677 0.1419
SRP193095 TOMM40L 84134 RNAseq -0.1397 0.3546
SRP219564 TOMM40L 84134 RNAseq -0.4038 0.3174
TCGA TOMM40L 84134 RNAseq -0.0513 0.4189

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by TOMM40L expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of TOMM40L:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TOMM40L 84134 10 0 20
GSE20123 TOMM40L 84134 10 0 20
GSE43470 TOMM40L 84134 7 2 34
GSE46452 TOMM40L 84134 2 1 56
GSE47630 TOMM40L 84134 14 0 26
GSE54993 TOMM40L 84134 0 6 64
GSE54994 TOMM40L 84134 16 0 37
GSE60625 TOMM40L 84134 0 0 11
GSE74703 TOMM40L 84134 7 2 27
GSE74704 TOMM40L 84134 4 0 16
TCGA TOMM40L 84134 45 3 48

Total number of gains: 115; Total number of losses: 14; Total Number of normals: 359.  


 

Somatic mutations of TOMM40L:

 

Generating mutation plots.

 

Highly correlated genes for TOMM40L:

 

Showing top 20/195 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TOMM40LMRPL90.840231303
TOMM40LMRFAP10.821502303
TOMM40LDUSP230.806668303
TOMM40LCCAR10.806228303
TOMM40LEIF5B0.805221303
TOMM40LGLRX20.802595303
TOMM40LZBED60.783414303
TOMM40LKLHL200.780474303
TOMM40LRP90.778228303
TOMM40LZMIZ20.766098303
TOMM40LCSPP10.765207303
TOMM40LMLEC0.758163303
TOMM40LRBM260.758004303
TOMM40LPPIG0.751545303
TOMM40LFH0.748433303
TOMM40LPPP6R20.74688303
TOMM40LYTHDF30.746687303
TOMM40LALS20.737738303
TOMM40LOSGEP0.737273303
TOMM40LUIMC10.737193303

For details and further investigation, click here