CTXN3

 

Full name: cortexin 3 Alias Symbol: 
Type: protein-coding gene Cytoband: 5q23.2
Entrez ID: 613212 HGNC ID: HGNC:31110 Ensembl Gene: ENSG00000205279 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CTXN3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CTXN3 613212 236374_at 0.0244 0.9325
GSE26886 CTXN3 613212 236374_at -0.1312 0.2253
GSE45670 CTXN3 613212 236374_at 0.0880 0.3179
GSE53622 CTXN3 613212 48962 -0.0270 0.8728
GSE53624 CTXN3 613212 48962 0.0882 0.5089
GSE63941 CTXN3 613212 236374_at 0.0838 0.5901
GSE77861 CTXN3 613212 236374_at -0.1223 0.1148
TCGA CTXN3 613212 RNAseq 1.5115 0.0884

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by CTXN3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CTXN3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CTXN3 613212 1 12 17
GSE20123 CTXN3 613212 1 12 17
GSE43470 CTXN3 613212 3 8 32
GSE46452 CTXN3 613212 0 27 32
GSE47630 CTXN3 613212 0 21 19
GSE54993 CTXN3 613212 9 1 60
GSE54994 CTXN3 613212 2 14 37
GSE60625 CTXN3 613212 0 0 11
GSE74703 CTXN3 613212 2 6 28
GSE74704 CTXN3 613212 1 6 13
TCGA CTXN3 613212 2 40 54

Total number of gains: 21; Total number of losses: 147; Total Number of normals: 320.  

 

Somatic mutations of CTXN3:

 

Generating mutation plots.

 

Highly correlated genes for CTXN3:

 

Showing all 13 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CTXN3NKD10.681648303
CTXN3LHFPL40.596967303
CTXN3MUC80.596179303
CTXN3RGP10.593296303
CTXN3LILRA20.581135303
CTXN3SDK20.581129403
CTXN3WNT7A0.572319303
CTXN3FSD20.550503303
CTXN3C3orf620.545527403
CTXN3KCNA50.526768303
CTXN3PDZD70.513764403
CTXN3SAMD140.512286403
CTXN3WNT160.510112403

For details and further investigation, click here