C3orf62

 

Full name: chromosome 3 open reading frame 62 Alias Symbol: FLJ43654
Type: protein-coding gene Cytoband: 3p21.31
Entrez ID: 375341 HGNC ID: HGNC:24771 Ensembl Gene: ENSG00000188315 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C3orf62:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C3orf62 375341 1569374_at 0.0220 0.9518
GSE26886 C3orf62 375341 1569374_at -0.2358 0.0212
GSE45670 C3orf62 375341 1569374_at 0.0255 0.8712
GSE53622 C3orf62 375341 48137 -0.4393 0.0000
GSE53624 C3orf62 375341 48137 -0.3559 0.0000
GSE63941 C3orf62 375341 1569374_at 0.0336 0.8446
GSE77861 C3orf62 375341 1569374_at -0.1174 0.3617
GSE97050 C3orf62 375341 A_32_P831725 -0.2771 0.4689
SRP007169 C3orf62 375341 RNAseq 0.1491 0.8181
SRP064894 C3orf62 375341 RNAseq 0.3751 0.0358
SRP133303 C3orf62 375341 RNAseq -0.3291 0.0171
SRP159526 C3orf62 375341 RNAseq -0.5710 0.0810
SRP193095 C3orf62 375341 RNAseq -0.3093 0.0046
SRP219564 C3orf62 375341 RNAseq -0.0676 0.8763
TCGA C3orf62 375341 RNAseq -0.1607 0.0836

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C3orf62 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C3orf62:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C3orf62 375341 0 18 12
GSE20123 C3orf62 375341 0 19 11
GSE43470 C3orf62 375341 0 18 25
GSE46452 C3orf62 375341 2 16 41
GSE47630 C3orf62 375341 1 24 15
GSE54993 C3orf62 375341 6 2 62
GSE54994 C3orf62 375341 0 36 17
GSE60625 C3orf62 375341 5 0 6
GSE74703 C3orf62 375341 0 14 22
GSE74704 C3orf62 375341 0 12 8
TCGA C3orf62 375341 0 78 18

Total number of gains: 14; Total number of losses: 237; Total Number of normals: 237.  


 

Somatic mutations of C3orf62:

 

Generating mutation plots.

 

Highly correlated genes for C3orf62:

 

Showing top 20/65 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C3orf62SCN10A0.72193303
C3orf62MPV17L0.675733404
C3orf62CAMK2A0.645909403
C3orf62YPEL10.643735303
C3orf62ACACB0.642457505
C3orf62LUZP20.626808303
C3orf62DPP60.619295303
C3orf62MAFF0.619277303
C3orf62HBEGF0.614193303
C3orf62C1orf940.611547303
C3orf62MESP10.611428303
C3orf62NMUR20.608778404
C3orf62PRDM50.603893303
C3orf62ART10.600099403
C3orf62PCAT40.598391303
C3orf62TIRAP0.598206604
C3orf62SPTAN10.59697303
C3orf62C2orf160.589132403
C3orf62TTLL100.587848303
C3orf62SHISA90.586421303

For details and further investigation, click here