WNT16

 

Full name: Wnt family member 16 Alias Symbol: 
Type: protein-coding gene Cytoband: 7q31.31
Entrez ID: 51384 HGNC ID: HGNC:16267 Ensembl Gene: ENSG00000002745 OMIM ID: 606267
Drug and gene relationship at DGIdb

 

WNT16 involved pathways:

KEGG pathway Description View
hsa04150mTOR signaling pathway
hsa04310Wnt signaling pathway
hsa04390Hippo signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa04916Melanogenesis
hsa05166HTLV-I infection
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05217Basal cell carcinoma

 

Expression of WNT16:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WNT16 51384 221113_s_at -0.1011 0.7558
GSE20347 WNT16 51384 221113_s_at -0.0675 0.4159
GSE23400 WNT16 51384 221113_s_at -0.1256 0.0021
GSE26886 WNT16 51384 221113_s_at -0.1811 0.1645
GSE29001 WNT16 51384 221113_s_at -0.0501 0.7970
GSE38129 WNT16 51384 221113_s_at 0.0044 0.9598
GSE45670 WNT16 51384 221113_s_at -0.0482 0.6681
GSE53622 WNT16 51384 55863 0.7084 0.0001
GSE53624 WNT16 51384 55863 1.4005 0.0000
GSE63941 WNT16 51384 221113_s_at 0.1316 0.6141
GSE77861 WNT16 51384 221113_s_at -0.2586 0.0333
TCGA WNT16 51384 RNAseq 0.5019 0.2119

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by WNT16 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WNT16:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WNT16 51384 6 2 22
GSE20123 WNT16 51384 7 2 21
GSE43470 WNT16 51384 3 3 37
GSE46452 WNT16 51384 8 1 50
GSE47630 WNT16 51384 7 4 29
GSE54993 WNT16 51384 2 6 62
GSE54994 WNT16 51384 10 6 37
GSE60625 WNT16 51384 0 0 11
GSE74703 WNT16 51384 3 3 30
GSE74704 WNT16 51384 5 2 13
TCGA WNT16 51384 28 20 48

Total number of gains: 79; Total number of losses: 49; Total Number of normals: 360.  


 

Somatic mutations of WNT16:

 

Generating mutation plots.

 

Highly correlated genes for WNT16:

 

Showing top 20/372 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WNT16OR6A20.740845303
WNT16APOA50.671947303
WNT16SERPINC10.667589303
WNT16DAB10.653504404
WNT16NEUROD40.650461403
WNT16VGLL20.645002404
WNT16IL1RAPL20.642476404
WNT16FGF230.64018505
WNT16MAGEC10.639729303
WNT16G6PC20.638836706
WNT16PSG60.637735505
WNT16P2RY40.636221404
WNT16CIITA0.6352403
WNT16GRM60.632631403
WNT16SLC45A20.632571404
WNT16IFT1220.630744303
WNT16GH10.629115403
WNT16IL190.62732303
WNT16KCNC40.626396303
WNT16SERPINA60.624975403

For details and further investigation, click here