| Full name: EF-hand calcium binding domain 12 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 3q21.3 | ||
| Entrez ID: 90288 | HGNC ID: HGNC:28061 | Ensembl Gene: ENSG00000172771 | OMIM ID: |
Expression of EFCAB12:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | EFCAB12 | 90288 | 232639_at | 0.1319 | 0.4781 | |
| GSE26886 | EFCAB12 | 90288 | 232639_at | 0.0544 | 0.5843 | |
| GSE45670 | EFCAB12 | 90288 | 232639_at | 0.0257 | 0.7667 | |
| GSE53622 | EFCAB12 | 90288 | 28623 | 0.2891 | 0.0002 | |
| GSE53624 | EFCAB12 | 90288 | 28623 | 0.5549 | 0.0000 | |
| GSE63941 | EFCAB12 | 90288 | 232639_at | 0.0363 | 0.8218 | |
| GSE77861 | EFCAB12 | 90288 | 232639_at | -0.1681 | 0.0569 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by EFCAB12 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of EFCAB12:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | EFCAB12 | 90288 | 17 | 0 | 13 | |
| GSE20123 | EFCAB12 | 90288 | 17 | 0 | 13 | |
| GSE43470 | EFCAB12 | 90288 | 19 | 0 | 24 | |
| GSE46452 | EFCAB12 | 90288 | 14 | 5 | 40 | |
| GSE47630 | EFCAB12 | 90288 | 18 | 3 | 19 | |
| GSE54993 | EFCAB12 | 90288 | 2 | 8 | 60 | |
| GSE54994 | EFCAB12 | 90288 | 32 | 3 | 18 | |
| GSE60625 | EFCAB12 | 90288 | 0 | 6 | 5 | |
| GSE74703 | EFCAB12 | 90288 | 17 | 0 | 19 | |
| GSE74704 | EFCAB12 | 90288 | 13 | 0 | 7 | |
| TCGA | EFCAB12 | 90288 | 58 | 5 | 33 |
Total number of gains: 207; Total number of losses: 30; Total Number of normals: 251.
Somatic mutations of EFCAB12:
Generating mutation plots.
Highly correlated genes for EFCAB12:
Showing top 20/43 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| EFCAB12 | CNOT3 | 0.687952 | 3 | 0 | 3 |
| EFCAB12 | MC3R | 0.666679 | 4 | 0 | 4 |
| EFCAB12 | TP73 | 0.636063 | 3 | 0 | 3 |
| EFCAB12 | SLC52A1 | 0.631122 | 3 | 0 | 3 |
| EFCAB12 | PRR7-AS1 | 0.630678 | 3 | 0 | 3 |
| EFCAB12 | NTNG2 | 0.627801 | 3 | 0 | 3 |
| EFCAB12 | PNPLA7 | 0.618863 | 3 | 0 | 3 |
| EFCAB12 | SZT2 | 0.618106 | 3 | 0 | 3 |
| EFCAB12 | PARD6G-AS1 | 0.617701 | 3 | 0 | 3 |
| EFCAB12 | SUN5 | 0.616602 | 3 | 0 | 3 |
| EFCAB12 | CELA3A | 0.616123 | 3 | 0 | 3 |
| EFCAB12 | LINC00930 | 0.613613 | 3 | 0 | 3 |
| EFCAB12 | DNAH9 | 0.609217 | 3 | 0 | 3 |
| EFCAB12 | APOA2 | 0.603478 | 3 | 0 | 3 |
| EFCAB12 | GPR182 | 0.599891 | 3 | 0 | 3 |
| EFCAB12 | HOXB-AS3 | 0.591684 | 4 | 0 | 3 |
| EFCAB12 | SLC25A53 | 0.590727 | 3 | 0 | 3 |
| EFCAB12 | BFSP2-AS1 | 0.588592 | 4 | 0 | 3 |
| EFCAB12 | CTXN1 | 0.587397 | 3 | 0 | 3 |
| EFCAB12 | ACOXL | 0.586127 | 3 | 0 | 3 |
For details and further investigation, click here
