| Full name: HOXB cluster antisense RNA 3 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 17q21.32 | ||
| Entrez ID: 404266 | HGNC ID: HGNC:40283 | Ensembl Gene: ENSG00000233101 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of HOXB-AS3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXB-AS3 | 404266 | 230743_at | -0.1105 | 0.6887 | |
| GSE26886 | HOXB-AS3 | 404266 | 239791_at | -0.1842 | 0.1725 | |
| GSE45670 | HOXB-AS3 | 404266 | 239791_at | -0.3306 | 0.0094 | |
| GSE53622 | HOXB-AS3 | 404266 | 5385 | 0.1748 | 0.0313 | |
| GSE53624 | HOXB-AS3 | 404266 | 5385 | 0.2213 | 0.0667 | |
| GSE63941 | HOXB-AS3 | 404266 | 239791_at | -0.0139 | 0.9596 | |
| GSE77861 | HOXB-AS3 | 404266 | 239791_at | -0.2935 | 0.0297 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by HOXB-AS3 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of HOXB-AS3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXB-AS3 | 404266 | 5 | 2 | 23 | |
| GSE20123 | HOXB-AS3 | 404266 | 5 | 2 | 23 | |
| GSE43470 | HOXB-AS3 | 404266 | 3 | 1 | 39 | |
| GSE46452 | HOXB-AS3 | 404266 | 32 | 0 | 27 | |
| GSE47630 | HOXB-AS3 | 404266 | 9 | 0 | 31 | |
| GSE54993 | HOXB-AS3 | 404266 | 2 | 4 | 64 | |
| GSE54994 | HOXB-AS3 | 404266 | 10 | 6 | 37 | |
| GSE60625 | HOXB-AS3 | 404266 | 4 | 0 | 7 | |
| GSE74703 | HOXB-AS3 | 404266 | 3 | 1 | 32 | |
| GSE74704 | HOXB-AS3 | 404266 | 4 | 1 | 15 |
Total number of gains: 77; Total number of losses: 17; Total Number of normals: 298.
Somatic mutations of HOXB-AS3:
Generating mutation plots.
Highly correlated genes for HOXB-AS3:
Showing top 20/245 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXB-AS3 | FNDC9 | 0.765982 | 4 | 0 | 4 |
| HOXB-AS3 | FOXP3 | 0.725644 | 3 | 0 | 3 |
| HOXB-AS3 | PDLIM2 | 0.697624 | 3 | 0 | 3 |
| HOXB-AS3 | TTTY11 | 0.683167 | 4 | 0 | 4 |
| HOXB-AS3 | PRR29 | 0.666801 | 4 | 0 | 3 |
| HOXB-AS3 | LINC00656 | 0.665143 | 4 | 0 | 3 |
| HOXB-AS3 | KCTD19 | 0.663173 | 3 | 0 | 3 |
| HOXB-AS3 | ST3GAL3 | 0.660072 | 3 | 0 | 3 |
| HOXB-AS3 | HRH2 | 0.659184 | 3 | 0 | 3 |
| HOXB-AS3 | EGFLAM-AS2 | 0.655496 | 3 | 0 | 3 |
| HOXB-AS3 | IQCF5-AS1 | 0.65494 | 3 | 0 | 3 |
| HOXB-AS3 | IL17RC | 0.652786 | 4 | 0 | 3 |
| HOXB-AS3 | WFDC9 | 0.652129 | 3 | 0 | 3 |
| HOXB-AS3 | LINC01122 | 0.652124 | 4 | 0 | 4 |
| HOXB-AS3 | C16orf86 | 0.650371 | 4 | 0 | 4 |
| HOXB-AS3 | LINC01192 | 0.647847 | 3 | 0 | 3 |
| HOXB-AS3 | SGSM1 | 0.645026 | 3 | 0 | 3 |
| HOXB-AS3 | C1orf167 | 0.643288 | 5 | 0 | 4 |
| HOXB-AS3 | MUC2 | 0.642018 | 3 | 0 | 3 |
| HOXB-AS3 | G6PC2 | 0.64187 | 4 | 0 | 3 |
For details and further investigation, click here
