EXOSC10

 

Full name: exosome component 10 Alias Symbol: PM-Scl|PM/Scl-100|Rrp6p|RRP6|p2|p3|p4
Type: protein-coding gene Cytoband: 1p36.22
Entrez ID: 5394 HGNC ID: HGNC:9138 Ensembl Gene: ENSG00000171824 OMIM ID: 605960
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of EXOSC10:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EXOSC10 5394 207541_s_at 0.3706 0.4425
GSE20347 EXOSC10 5394 207541_s_at 0.0928 0.5804
GSE23400 EXOSC10 5394 207541_s_at 0.2832 0.0000
GSE26886 EXOSC10 5394 207541_s_at 0.6108 0.0028
GSE29001 EXOSC10 5394 207541_s_at 0.3484 0.2441
GSE38129 EXOSC10 5394 207541_s_at 0.1732 0.1476
GSE45670 EXOSC10 5394 207541_s_at 0.1902 0.2422
GSE53622 EXOSC10 5394 38890 0.1143 0.1221
GSE53624 EXOSC10 5394 38890 0.1804 0.0015
GSE63941 EXOSC10 5394 207541_s_at 0.8744 0.0057
GSE77861 EXOSC10 5394 207541_s_at 0.1011 0.7314
GSE97050 EXOSC10 5394 A_23_P62868 0.1209 0.6193
SRP007169 EXOSC10 5394 RNAseq 0.5326 0.3051
SRP008496 EXOSC10 5394 RNAseq 0.4715 0.1253
SRP064894 EXOSC10 5394 RNAseq 0.4184 0.0011
SRP133303 EXOSC10 5394 RNAseq 0.1400 0.2698
SRP159526 EXOSC10 5394 RNAseq 0.1646 0.6603
SRP193095 EXOSC10 5394 RNAseq 0.2253 0.0030
SRP219564 EXOSC10 5394 RNAseq -0.0853 0.6851
TCGA EXOSC10 5394 RNAseq 0.0681 0.1501

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by EXOSC10 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EXOSC10:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EXOSC10 5394 0 5 25
GSE20123 EXOSC10 5394 0 4 26
GSE43470 EXOSC10 5394 6 5 32
GSE46452 EXOSC10 5394 7 1 51
GSE47630 EXOSC10 5394 8 4 28
GSE54993 EXOSC10 5394 3 1 66
GSE54994 EXOSC10 5394 11 4 38
GSE60625 EXOSC10 5394 0 0 11
GSE74703 EXOSC10 5394 5 3 28
GSE74704 EXOSC10 5394 0 0 20
TCGA EXOSC10 5394 10 22 64

Total number of gains: 50; Total number of losses: 49; Total Number of normals: 389.  


 

Somatic mutations of EXOSC10:

 

Generating mutation plots.

 

Highly correlated genes for EXOSC10:

 

Showing top 20/834 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EXOSC10ZNF1210.830819303
EXOSC10RPL7L10.823193303
EXOSC10ARMC100.779922303
EXOSC10KDM2A0.774915303
EXOSC10THEM40.772027303
EXOSC10PET1170.771398303
EXOSC10RFNG0.769909303
EXOSC10ZNF7660.76953303
EXOSC10ZMYND190.766427303
EXOSC10RICTOR0.765986303
EXOSC10C20orf270.76571303
EXOSC10DNAJC130.765394303
EXOSC10COQ40.75899303
EXOSC10MRPL550.757283303
EXOSC10PCID20.756828404
EXOSC10RCHY10.753783303
EXOSC10ZKSCAN40.75188303
EXOSC10CELF10.751709403
EXOSC10ZFAS10.748984303
EXOSC10TSNARE10.742328303

For details and further investigation, click here