| Full name: t-SNARE domain containing 1 | Alias Symbol: FLJ31164 | ||
| Type: protein-coding gene | Cytoband: 8q24.3 | ||
| Entrez ID: 203062 | HGNC ID: HGNC:26437 | Ensembl Gene: ENSG00000171045 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TSNARE1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TSNARE1 | 203062 | 231317_at | 0.0580 | 0.8690 | |
| GSE26886 | TSNARE1 | 203062 | 228862_at | 0.5254 | 0.0003 | |
| GSE45670 | TSNARE1 | 203062 | 231317_at | -0.0792 | 0.5052 | |
| GSE53622 | TSNARE1 | 203062 | 76068 | 0.3162 | 0.0003 | |
| GSE53624 | TSNARE1 | 203062 | 76068 | 0.5410 | 0.0000 | |
| GSE63941 | TSNARE1 | 203062 | 231317_at | 0.0112 | 0.9669 | |
| GSE77861 | TSNARE1 | 203062 | 228862_at | -0.1370 | 0.4762 | |
| GSE97050 | TSNARE1 | 203062 | A_33_P3291567 | -0.0958 | 0.6863 | |
| SRP007169 | TSNARE1 | 203062 | RNAseq | -0.2004 | 0.6608 | |
| SRP008496 | TSNARE1 | 203062 | RNAseq | -0.0921 | 0.7510 | |
| SRP064894 | TSNARE1 | 203062 | RNAseq | 0.3860 | 0.0591 | |
| SRP133303 | TSNARE1 | 203062 | RNAseq | -0.0559 | 0.6576 | |
| SRP159526 | TSNARE1 | 203062 | RNAseq | 0.6478 | 0.0697 | |
| SRP193095 | TSNARE1 | 203062 | RNAseq | 0.4507 | 0.0054 | |
| SRP219564 | TSNARE1 | 203062 | RNAseq | 0.5083 | 0.3839 | |
| TCGA | TSNARE1 | 203062 | RNAseq | 0.0155 | 0.8440 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TSNARE1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TSNARE1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TSNARE1 | 203062 | 16 | 1 | 13 | |
| GSE20123 | TSNARE1 | 203062 | 16 | 1 | 13 | |
| GSE43470 | TSNARE1 | 203062 | 17 | 2 | 24 | |
| GSE46452 | TSNARE1 | 203062 | 27 | 0 | 32 | |
| GSE47630 | TSNARE1 | 203062 | 23 | 1 | 16 | |
| GSE54993 | TSNARE1 | 203062 | 0 | 25 | 45 | |
| GSE54994 | TSNARE1 | 203062 | 39 | 1 | 13 | |
| GSE60625 | TSNARE1 | 203062 | 3 | 4 | 4 | |
| GSE74703 | TSNARE1 | 203062 | 15 | 1 | 20 | |
| GSE74704 | TSNARE1 | 203062 | 10 | 0 | 10 | |
| TCGA | TSNARE1 | 203062 | 64 | 2 | 30 |
Total number of gains: 230; Total number of losses: 38; Total Number of normals: 220.
Somatic mutations of TSNARE1:
Generating mutation plots.
Highly correlated genes for TSNARE1:
Showing top 20/308 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TSNARE1 | GATC | 0.835535 | 3 | 0 | 3 |
| TSNARE1 | POLR2I | 0.775365 | 3 | 0 | 3 |
| TSNARE1 | GALM | 0.7621 | 3 | 0 | 3 |
| TSNARE1 | C19orf18 | 0.755498 | 3 | 0 | 3 |
| TSNARE1 | MRPL43 | 0.751803 | 3 | 0 | 3 |
| TSNARE1 | EIF3G | 0.751344 | 3 | 0 | 3 |
| TSNARE1 | KLHL21 | 0.750694 | 4 | 0 | 4 |
| TSNARE1 | CCDC97 | 0.749771 | 3 | 0 | 3 |
| TSNARE1 | ZNF358 | 0.748863 | 5 | 0 | 5 |
| TSNARE1 | BAG6 | 0.747215 | 3 | 0 | 3 |
| TSNARE1 | MATN4 | 0.746956 | 3 | 0 | 3 |
| TSNARE1 | EFCAB7 | 0.746703 | 3 | 0 | 3 |
| TSNARE1 | FOXP4 | 0.746252 | 4 | 0 | 3 |
| TSNARE1 | TBC1D9B | 0.743827 | 3 | 0 | 3 |
| TSNARE1 | EXOSC10 | 0.742328 | 3 | 0 | 3 |
| TSNARE1 | GGPS1 | 0.740649 | 3 | 0 | 3 |
| TSNARE1 | SH2B1 | 0.737084 | 5 | 0 | 5 |
| TSNARE1 | SRRT | 0.736342 | 3 | 0 | 3 |
| TSNARE1 | LNP1 | 0.733411 | 3 | 0 | 3 |
| TSNARE1 | TRMT61A | 0.731806 | 3 | 0 | 3 |
For details and further investigation, click here
