FAM71B

 

Full name: family with sequence similarity 71 member B Alias Symbol: MGC26988
Type: protein-coding gene Cytoband: 5q33.3
Entrez ID: 153745 HGNC ID: HGNC:28397 Ensembl Gene: ENSG00000170613 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of FAM71B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM71B 153745 1553629_a_at 0.1756 0.4220
GSE26886 FAM71B 153745 1553629_a_at 0.1464 0.2444
GSE45670 FAM71B 153745 1553629_a_at 0.0893 0.4918
GSE53622 FAM71B 153745 112862 -0.1799 0.0192
GSE53624 FAM71B 153745 112862 0.1624 0.0746
GSE63941 FAM71B 153745 1553629_a_at 0.0640 0.6553
GSE77861 FAM71B 153745 1553629_a_at -0.1108 0.2576

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by FAM71B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of FAM71B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM71B 153745 0 11 19
GSE20123 FAM71B 153745 0 11 19
GSE43470 FAM71B 153745 2 11 30
GSE46452 FAM71B 153745 0 27 32
GSE47630 FAM71B 153745 0 20 20
GSE54993 FAM71B 153745 9 1 60
GSE54994 FAM71B 153745 1 16 36
GSE60625 FAM71B 153745 0 0 11
GSE74703 FAM71B 153745 2 8 26
GSE74704 FAM71B 153745 0 6 14
TCGA FAM71B 153745 4 36 56

Total number of gains: 18; Total number of losses: 147; Total Number of normals: 323.  

 

Somatic mutations of FAM71B:

 

Generating mutation plots.

 

Highly correlated genes for FAM71B:

 

Showing all 16 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM71BNLRP50.744685303
FAM71BHPX0.644144303
FAM71BGRP0.603075303
FAM71BNCS10.586232303
FAM71BKIF60.583154303
FAM71BHOXD120.573945303
FAM71BWWC2-AS20.57222303
FAM71BGPR260.571603403
FAM71BLYPD80.569516403
FAM71BDPYSL50.56348303
FAM71BTMEM1050.560544303
FAM71BRTP50.551121403
FAM71BMMP170.550659303
FAM71BLINC001650.539891303
FAM71BMAMSTR0.53602403
FAM71BNXPE10.506156503

For details and further investigation, click here