| Full name: long intergenic non-protein coding RNA 208 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 8p23.1 | ||
| Entrez ID: 83655 | HGNC ID: HGNC:15535 | Ensembl Gene: ENSG00000170983 | OMIM ID: |
Expression of LINC00208:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00208 | 83655 | 1552955_at | 0.0983 | 0.7213 | |
| GSE26886 | LINC00208 | 83655 | 1552955_at | 0.0845 | 0.5610 | |
| GSE45670 | LINC00208 | 83655 | 1552955_at | 0.2055 | 0.0272 | |
| GSE53622 | LINC00208 | 83655 | 82478 | 0.3317 | 0.0081 | |
| GSE53624 | LINC00208 | 83655 | 82478 | 0.3478 | 0.0002 | |
| GSE63941 | LINC00208 | 83655 | 1552955_at | 0.0840 | 0.6439 | |
| GSE77861 | LINC00208 | 83655 | 1552955_at | -0.0196 | 0.8623 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00208 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00208:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00208 | 83655 | 4 | 11 | 15 | |
| GSE20123 | LINC00208 | 83655 | 4 | 11 | 15 | |
| GSE43470 | LINC00208 | 83655 | 4 | 9 | 30 | |
| GSE46452 | LINC00208 | 83655 | 12 | 14 | 33 | |
| GSE47630 | LINC00208 | 83655 | 10 | 7 | 23 | |
| GSE54993 | LINC00208 | 83655 | 3 | 14 | 53 | |
| GSE54994 | LINC00208 | 83655 | 8 | 19 | 26 | |
| GSE60625 | LINC00208 | 83655 | 3 | 0 | 8 | |
| GSE74703 | LINC00208 | 83655 | 4 | 7 | 25 | |
| GSE74704 | LINC00208 | 83655 | 3 | 7 | 10 | |
| TCGA | LINC00208 | 83655 | 14 | 39 | 43 |
Total number of gains: 69; Total number of losses: 138; Total Number of normals: 281.
Somatic mutations of LINC00208:
Generating mutation plots.
Highly correlated genes for LINC00208:
Showing top 20/69 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00208 | BMP15 | 0.730807 | 3 | 0 | 3 |
| LINC00208 | HPX | 0.693435 | 4 | 0 | 4 |
| LINC00208 | CLEC1B | 0.682368 | 3 | 0 | 3 |
| LINC00208 | TNFRSF10C | 0.671295 | 3 | 0 | 3 |
| LINC00208 | KRTAP4-8 | 0.6377 | 3 | 0 | 3 |
| LINC00208 | UCP1 | 0.626676 | 3 | 0 | 3 |
| LINC00208 | GRIK4 | 0.615699 | 3 | 0 | 3 |
| LINC00208 | FAM170B-AS1 | 0.611245 | 3 | 0 | 3 |
| LINC00208 | CELA3A | 0.605354 | 4 | 0 | 4 |
| LINC00208 | ATCAY | 0.603473 | 4 | 0 | 4 |
| LINC00208 | FAM71F1 | 0.603298 | 4 | 0 | 4 |
| LINC00208 | HIPK1-AS1 | 0.597173 | 3 | 0 | 3 |
| LINC00208 | CABP4 | 0.594132 | 3 | 0 | 3 |
| LINC00208 | DLGAP2-AS1 | 0.591494 | 4 | 0 | 3 |
| LINC00208 | VWA5B2 | 0.590049 | 4 | 0 | 3 |
| LINC00208 | DNAH9 | 0.576195 | 4 | 0 | 4 |
| LINC00208 | C2orf72 | 0.571823 | 4 | 0 | 3 |
| LINC00208 | ASB12 | 0.571718 | 4 | 0 | 3 |
| LINC00208 | DGCR9 | 0.571223 | 4 | 0 | 3 |
| LINC00208 | TSGA13 | 0.569595 | 4 | 0 | 4 |
For details and further investigation, click here
