| Full name: family with sequence similarity 71 member F1 | Alias Symbol: NYD-SP18 | ||
| Type: protein-coding gene | Cytoband: 7q32.1 | ||
| Entrez ID: 84691 | HGNC ID: HGNC:30704 | Ensembl Gene: ENSG00000135248 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of FAM71F1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FAM71F1 | 84691 | 236214_at | -0.0970 | 0.7588 | |
| GSE26886 | FAM71F1 | 84691 | 236214_at | 0.1542 | 0.2153 | |
| GSE45670 | FAM71F1 | 84691 | 231466_at | 0.1629 | 0.2621 | |
| GSE53622 | FAM71F1 | 84691 | 104882 | 0.4688 | 0.0007 | |
| GSE53624 | FAM71F1 | 84691 | 104882 | 0.5746 | 0.0000 | |
| GSE63941 | FAM71F1 | 84691 | 231466_at | 0.0608 | 0.7068 | |
| GSE77861 | FAM71F1 | 84691 | 231466_at | -0.0539 | 0.7283 | |
| GSE97050 | FAM71F1 | 84691 | A_23_P134204 | -0.0695 | 0.8150 | |
| TCGA | FAM71F1 | 84691 | RNAseq | 3.7302 | 0.0003 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by FAM71F1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of FAM71F1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FAM71F1 | 84691 | 8 | 1 | 21 | |
| GSE20123 | FAM71F1 | 84691 | 8 | 1 | 21 | |
| GSE43470 | FAM71F1 | 84691 | 2 | 3 | 38 | |
| GSE46452 | FAM71F1 | 84691 | 7 | 2 | 50 | |
| GSE47630 | FAM71F1 | 84691 | 7 | 4 | 29 | |
| GSE54993 | FAM71F1 | 84691 | 3 | 5 | 62 | |
| GSE54994 | FAM71F1 | 84691 | 8 | 7 | 38 | |
| GSE60625 | FAM71F1 | 84691 | 0 | 0 | 11 | |
| GSE74703 | FAM71F1 | 84691 | 2 | 3 | 31 | |
| GSE74704 | FAM71F1 | 84691 | 4 | 1 | 15 | |
| TCGA | FAM71F1 | 84691 | 28 | 22 | 46 |
Total number of gains: 77; Total number of losses: 49; Total Number of normals: 362.
Somatic mutations of FAM71F1:
Generating mutation plots.
Highly correlated genes for FAM71F1:
Showing top 20/430 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FAM71F1 | C10orf91 | 0.832158 | 3 | 0 | 3 |
| FAM71F1 | PRAMEF5 | 0.810092 | 3 | 0 | 3 |
| FAM71F1 | OR2A5 | 0.804646 | 3 | 0 | 3 |
| FAM71F1 | YY2 | 0.799654 | 3 | 0 | 3 |
| FAM71F1 | OR2T1 | 0.798301 | 3 | 0 | 3 |
| FAM71F1 | KRTAP10-12 | 0.794648 | 3 | 0 | 3 |
| FAM71F1 | GPR173 | 0.789327 | 3 | 0 | 3 |
| FAM71F1 | CPLX2 | 0.788992 | 3 | 0 | 3 |
| FAM71F1 | FOXE3 | 0.782957 | 3 | 0 | 3 |
| FAM71F1 | ZNF527 | 0.779364 | 3 | 0 | 3 |
| FAM71F1 | PRSS38 | 0.776134 | 3 | 0 | 3 |
| FAM71F1 | OR2T27 | 0.773484 | 3 | 0 | 3 |
| FAM71F1 | PLA2G2C | 0.772562 | 3 | 0 | 3 |
| FAM71F1 | INSC | 0.771703 | 3 | 0 | 3 |
| FAM71F1 | DCDC1 | 0.771494 | 3 | 0 | 3 |
| FAM71F1 | KCNC3 | 0.766749 | 3 | 0 | 3 |
| FAM71F1 | FFAR1 | 0.766601 | 4 | 0 | 4 |
| FAM71F1 | BAALC | 0.765904 | 3 | 0 | 3 |
| FAM71F1 | GPR182 | 0.763051 | 5 | 0 | 5 |
| FAM71F1 | OR2B11 | 0.761655 | 3 | 0 | 3 |
For details and further investigation, click here
