| Full name: long intergenic non-protein coding RNA 943 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q24.32 | ||
| Entrez ID: 100507206 | HGNC ID: HGNC:48639 | Ensembl Gene: ENSG00000189238 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00943:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00943 | 100507206 | 231440_at | -0.0019 | 0.9957 | |
| GSE26886 | LINC00943 | 100507206 | 231440_at | -0.2817 | 0.0241 | |
| GSE45670 | LINC00943 | 100507206 | 231440_at | 0.0123 | 0.9227 | |
| GSE53622 | LINC00943 | 100507206 | 42379 | 0.0951 | 0.1400 | |
| GSE53624 | LINC00943 | 100507206 | 42379 | 0.2333 | 0.0001 | |
| GSE63941 | LINC00943 | 100507206 | 231440_at | 0.0344 | 0.8423 | |
| GSE77861 | LINC00943 | 100507206 | 231440_at | -0.0556 | 0.5788 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00943 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00943:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00943 | 100507206 | 3 | 4 | 23 | |
| GSE20123 | LINC00943 | 100507206 | 3 | 4 | 23 | |
| GSE43470 | LINC00943 | 100507206 | 3 | 0 | 40 | |
| GSE46452 | LINC00943 | 100507206 | 9 | 1 | 49 | |
| GSE47630 | LINC00943 | 100507206 | 9 | 3 | 28 | |
| GSE54993 | LINC00943 | 100507206 | 0 | 5 | 65 | |
| GSE54994 | LINC00943 | 100507206 | 4 | 8 | 41 | |
| GSE60625 | LINC00943 | 100507206 | 0 | 0 | 11 | |
| GSE74703 | LINC00943 | 100507206 | 3 | 0 | 33 | |
| GSE74704 | LINC00943 | 100507206 | 2 | 3 | 15 | |
| TCGA | LINC00943 | 100507206 | 21 | 11 | 64 |
Total number of gains: 57; Total number of losses: 39; Total Number of normals: 392.
Somatic mutations of LINC00943:
Generating mutation plots.
Highly correlated genes for LINC00943:
Showing top 20/116 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00943 | MPV17L | 0.745739 | 3 | 0 | 3 |
| LINC00943 | CST8 | 0.711871 | 3 | 0 | 3 |
| LINC00943 | GLB1L3 | 0.705417 | 3 | 0 | 3 |
| LINC00943 | LINC01119 | 0.679239 | 3 | 0 | 3 |
| LINC00943 | NKX6-3 | 0.667163 | 3 | 0 | 3 |
| LINC00943 | MAP3K19 | 0.665888 | 3 | 0 | 3 |
| LINC00943 | FGA | 0.663953 | 4 | 0 | 3 |
| LINC00943 | TAT | 0.651806 | 4 | 0 | 4 |
| LINC00943 | TTLL7-IT1 | 0.646089 | 3 | 0 | 3 |
| LINC00943 | GKN2 | 0.645289 | 4 | 0 | 3 |
| LINC00943 | DPP6 | 0.644916 | 3 | 0 | 3 |
| LINC00943 | C20orf203 | 0.635333 | 4 | 0 | 3 |
| LINC00943 | IFITM10 | 0.633044 | 3 | 0 | 3 |
| LINC00943 | SATB2-AS1 | 0.629496 | 3 | 0 | 3 |
| LINC00943 | KIR3DL3 | 0.625373 | 3 | 0 | 3 |
| LINC00943 | FAM71D | 0.621487 | 3 | 0 | 3 |
| LINC00943 | KCNF1 | 0.618908 | 3 | 0 | 3 |
| LINC00943 | ZNRF4 | 0.617035 | 4 | 0 | 3 |
| LINC00943 | OR51B5 | 0.616493 | 4 | 0 | 3 |
| LINC00943 | C6orf201 | 0.616064 | 4 | 0 | 3 |
For details and further investigation, click here
