SCAP

 

Full name: SREBF chaperone Alias Symbol: KIAA0199
Type: protein-coding gene Cytoband: 3p21.31
Entrez ID: 22937 HGNC ID: HGNC:30634 Ensembl Gene: ENSG00000114650 OMIM ID: 601510
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of SCAP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SCAP 22937 212329_at 0.2004 0.5947
GSE20347 SCAP 22937 212329_at -0.5135 0.0005
GSE23400 SCAP 22937 212329_at -0.2225 0.0002
GSE26886 SCAP 22937 212329_at -0.4765 0.0167
GSE29001 SCAP 22937 212329_at -0.3709 0.0338
GSE38129 SCAP 22937 212329_at -0.4104 0.0000
GSE45670 SCAP 22937 212329_at -0.1381 0.2344
GSE53622 SCAP 22937 21361 -0.4058 0.0000
GSE53624 SCAP 22937 21361 -0.3984 0.0000
GSE63941 SCAP 22937 212329_at -0.9394 0.0040
GSE77861 SCAP 22937 212329_at -0.2266 0.3199
GSE97050 SCAP 22937 A_23_P252825 -0.1997 0.3406
SRP007169 SCAP 22937 RNAseq -0.9786 0.0135
SRP008496 SCAP 22937 RNAseq -1.0018 0.0000
SRP064894 SCAP 22937 RNAseq -0.1270 0.4667
SRP133303 SCAP 22937 RNAseq -0.7385 0.0000
SRP159526 SCAP 22937 RNAseq -0.4472 0.0800
SRP193095 SCAP 22937 RNAseq -0.4197 0.0000
SRP219564 SCAP 22937 RNAseq -0.1901 0.6774
TCGA SCAP 22937 RNAseq -0.1544 0.0007

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by SCAP expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SCAP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SCAP 22937 0 18 12
GSE20123 SCAP 22937 0 19 11
GSE43470 SCAP 22937 0 19 24
GSE46452 SCAP 22937 2 17 40
GSE47630 SCAP 22937 2 23 15
GSE54993 SCAP 22937 7 2 61
GSE54994 SCAP 22937 0 36 17
GSE60625 SCAP 22937 5 0 6
GSE74703 SCAP 22937 0 15 21
GSE74704 SCAP 22937 0 12 8
TCGA SCAP 22937 1 75 20

Total number of gains: 17; Total number of losses: 236; Total Number of normals: 235.  


 

Somatic mutations of SCAP:

 

Generating mutation plots.

 

Highly correlated genes for SCAP:

 

Showing top 20/179 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SCAPSHROOM40.641089303
SCAPMAPKAPK30.63448111010
SCAPMTMR100.630501404
SCAPHYMAI0.623838403
SCAPDNM20.622567303
SCAPRAB11B-AS10.618543303
SCAPWDR820.616852806
SCAPRPL140.61286706
SCAPDHX340.609596303
SCAPKRTAP20-10.605089303
SCAPBTBD190.604096303
SCAPVARS20.602604705
SCAPCOX190.599972303
SCAPSFI10.592679403
SCAPFAM163B0.592205303
SCAPSRCAP0.587342503
SCAPSIL10.582552303
SCAPMAFG0.582311403
SCAPCC2D1B0.58136503
SCAPSH3BGRL30.578532605

For details and further investigation, click here