| Full name: SDCBP2 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 20p13 | ||
| Entrez ID: 100507495 | HGNC ID: HGNC:44314 | Ensembl Gene: ENSG00000234684 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SDCBP2-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SDCBP2-AS1 | 100507495 | 239248_at | 0.1585 | 0.7098 | |
| GSE26886 | SDCBP2-AS1 | 100507495 | 239248_at | -0.1931 | 0.0526 | |
| GSE53622 | SDCBP2-AS1 | 100507495 | 26565 | 0.2944 | 0.0000 | |
| GSE53624 | SDCBP2-AS1 | 100507495 | 26565 | 0.1218 | 0.2183 | |
| GSE77861 | SDCBP2-AS1 | 100507495 | 239248_at | -0.1232 | 0.2560 | |
| SRP064894 | SDCBP2-AS1 | 100507495 | RNAseq | 0.2499 | 0.2911 | |
| SRP133303 | SDCBP2-AS1 | 100507495 | RNAseq | 0.0588 | 0.6238 | |
| SRP159526 | SDCBP2-AS1 | 100507495 | RNAseq | 0.5780 | 0.0156 | |
| SRP193095 | SDCBP2-AS1 | 100507495 | RNAseq | 0.2241 | 0.1195 | |
| SRP219564 | SDCBP2-AS1 | 100507495 | RNAseq | -0.2542 | 0.4538 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SDCBP2-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SDCBP2-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SDCBP2-AS1 | 100507495 | 12 | 4 | 14 | |
| GSE20123 | SDCBP2-AS1 | 100507495 | 13 | 4 | 13 | |
| GSE43470 | SDCBP2-AS1 | 100507495 | 11 | 1 | 31 | |
| GSE46452 | SDCBP2-AS1 | 100507495 | 26 | 1 | 32 | |
| GSE47630 | SDCBP2-AS1 | 100507495 | 19 | 4 | 17 | |
| GSE54993 | SDCBP2-AS1 | 100507495 | 2 | 14 | 54 | |
| GSE54994 | SDCBP2-AS1 | 100507495 | 24 | 2 | 27 | |
| GSE60625 | SDCBP2-AS1 | 100507495 | 0 | 0 | 11 | |
| GSE74703 | SDCBP2-AS1 | 100507495 | 10 | 1 | 25 | |
| GSE74704 | SDCBP2-AS1 | 100507495 | 8 | 2 | 10 |
Total number of gains: 125; Total number of losses: 33; Total Number of normals: 234.
Somatic mutations of SDCBP2-AS1:
Generating mutation plots.
Highly correlated genes for SDCBP2-AS1:
Showing all 20 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SDCBP2-AS1 | EQTN | 0.650575 | 3 | 0 | 3 |
| SDCBP2-AS1 | MMP19 | 0.631355 | 3 | 0 | 3 |
| SDCBP2-AS1 | GAGE1 | 0.614416 | 3 | 0 | 3 |
| SDCBP2-AS1 | C1orf167 | 0.609372 | 3 | 0 | 3 |
| SDCBP2-AS1 | ASB16 | 0.606616 | 4 | 0 | 4 |
| SDCBP2-AS1 | OR10A3 | 0.599692 | 3 | 0 | 3 |
| SDCBP2-AS1 | ZNF280B | 0.59887 | 3 | 0 | 3 |
| SDCBP2-AS1 | LINC00315 | 0.593992 | 4 | 0 | 3 |
| SDCBP2-AS1 | LINC01282 | 0.579941 | 4 | 0 | 3 |
| SDCBP2-AS1 | C2orf72 | 0.568778 | 4 | 0 | 3 |
| SDCBP2-AS1 | CCDC62 | 0.565491 | 3 | 0 | 3 |
| SDCBP2-AS1 | CHST13 | 0.563351 | 3 | 0 | 3 |
| SDCBP2-AS1 | PRKACG | 0.560661 | 4 | 0 | 3 |
| SDCBP2-AS1 | ASXL3 | 0.557443 | 3 | 0 | 3 |
| SDCBP2-AS1 | CLEC4D | 0.552172 | 3 | 0 | 3 |
| SDCBP2-AS1 | RNASE3 | 0.525728 | 4 | 0 | 3 |
| SDCBP2-AS1 | CSMD2-AS1 | 0.520221 | 4 | 0 | 3 |
| SDCBP2-AS1 | TTTY11 | 0.520016 | 4 | 0 | 3 |
| SDCBP2-AS1 | KRT82 | 0.505738 | 4 | 0 | 3 |
| SDCBP2-AS1 | LINC01312 | 0.503945 | 4 | 0 | 3 |
For details and further investigation, click here
