| Full name: carbohydrate sulfotransferase 13 | Alias Symbol: C4ST3 | ||
| Type: protein-coding gene | Cytoband: 3q21.3 | ||
| Entrez ID: 166012 | HGNC ID: HGNC:21755 | Ensembl Gene: ENSG00000180767 | OMIM ID: 610124 |
| Drug and gene relationship at DGIdb | |||
Expression of CHST13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CHST13 | 166012 | 242503_at | -0.0106 | 0.9697 | |
| GSE26886 | CHST13 | 166012 | 242503_at | 0.3500 | 0.0403 | |
| GSE45670 | CHST13 | 166012 | 242503_at | -0.0908 | 0.3445 | |
| GSE53622 | CHST13 | 166012 | 387 | 0.8155 | 0.0000 | |
| GSE53624 | CHST13 | 166012 | 125263 | -0.3308 | 0.0101 | |
| GSE63941 | CHST13 | 166012 | 242503_at | 0.2606 | 0.1025 | |
| GSE77861 | CHST13 | 166012 | 242503_at | -0.0357 | 0.8232 | |
| GSE97050 | CHST13 | 166012 | A_33_P3345186 | 0.4051 | 0.3051 | |
| SRP219564 | CHST13 | 166012 | RNAseq | 3.6714 | 0.0000 | |
| TCGA | CHST13 | 166012 | RNAseq | 0.5263 | 0.1984 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by CHST13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CHST13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CHST13 | 166012 | 17 | 0 | 13 | |
| GSE20123 | CHST13 | 166012 | 17 | 0 | 13 | |
| GSE43470 | CHST13 | 166012 | 19 | 0 | 24 | |
| GSE46452 | CHST13 | 166012 | 14 | 5 | 40 | |
| GSE47630 | CHST13 | 166012 | 17 | 4 | 19 | |
| GSE54993 | CHST13 | 166012 | 2 | 7 | 61 | |
| GSE54994 | CHST13 | 166012 | 31 | 3 | 19 | |
| GSE60625 | CHST13 | 166012 | 0 | 6 | 5 | |
| GSE74703 | CHST13 | 166012 | 17 | 0 | 19 | |
| GSE74704 | CHST13 | 166012 | 13 | 0 | 7 | |
| TCGA | CHST13 | 166012 | 55 | 6 | 35 |
Total number of gains: 202; Total number of losses: 31; Total Number of normals: 255.
Somatic mutations of CHST13:
Generating mutation plots.
Highly correlated genes for CHST13:
Showing top 20/354 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CHST13 | RIN1 | 0.759273 | 3 | 0 | 3 |
| CHST13 | GRAP | 0.756884 | 3 | 0 | 3 |
| CHST13 | FSCN3 | 0.748518 | 3 | 0 | 3 |
| CHST13 | CDRT15 | 0.731364 | 3 | 0 | 3 |
| CHST13 | COL27A1 | 0.722222 | 3 | 0 | 3 |
| CHST13 | C11orf86 | 0.719692 | 3 | 0 | 3 |
| CHST13 | CRYBB1 | 0.7075 | 5 | 0 | 5 |
| CHST13 | PTGER1 | 0.707469 | 4 | 0 | 4 |
| CHST13 | GFRA4 | 0.695165 | 3 | 0 | 3 |
| CHST13 | SYT9 | 0.691699 | 3 | 0 | 3 |
| CHST13 | CORO7 | 0.690415 | 3 | 0 | 3 |
| CHST13 | REG3A | 0.685432 | 4 | 0 | 3 |
| CHST13 | MICALL2 | 0.682488 | 3 | 0 | 3 |
| CHST13 | GNB3 | 0.680649 | 5 | 0 | 4 |
| CHST13 | STMN4 | 0.680618 | 3 | 0 | 3 |
| CHST13 | CHST8 | 0.680007 | 3 | 0 | 3 |
| CHST13 | DMP1 | 0.674477 | 3 | 0 | 3 |
| CHST13 | SIM1 | 0.674214 | 3 | 0 | 3 |
| CHST13 | ARVCF | 0.673959 | 4 | 0 | 3 |
| CHST13 | FFAR1 | 0.672863 | 5 | 0 | 4 |
For details and further investigation, click here
