| Full name: zinc finger protein 90 | Alias Symbol: HTF9 | ||
| Type: protein-coding gene | Cytoband: 19p12 | ||
| Entrez ID: 7643 | HGNC ID: HGNC:13165 | Ensembl Gene: ENSG00000213988 | OMIM ID: 603973 |
| Drug and gene relationship at DGIdb | |||
Expression of ZNF90:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZNF90 | 7643 | 1562133_x_at | 0.0310 | 0.8714 | |
| GSE26886 | ZNF90 | 7643 | 1562133_x_at | -0.0025 | 0.9844 | |
| GSE45670 | ZNF90 | 7643 | 1562133_x_at | -0.0452 | 0.5585 | |
| GSE53622 | ZNF90 | 7643 | 19723 | -0.1597 | 0.0625 | |
| GSE53624 | ZNF90 | 7643 | 19723 | -0.1547 | 0.0561 | |
| GSE63941 | ZNF90 | 7643 | 1562133_x_at | 0.3336 | 0.0087 | |
| GSE77861 | ZNF90 | 7643 | 1562133_x_at | -0.0636 | 0.3816 | |
| GSE97050 | ZNF90 | A_19_P00801042 | 0.0344 | 0.8728 | ||
| SRP133303 | ZNF90 | 7643 | RNAseq | -0.0346 | 0.9470 | |
| SRP159526 | ZNF90 | 7643 | RNAseq | -0.0276 | 0.9779 | |
| SRP193095 | ZNF90 | 7643 | RNAseq | -0.2542 | 0.4322 | |
| SRP219564 | ZNF90 | 7643 | RNAseq | 0.2807 | 0.6783 | |
| TCGA | ZNF90 | 7643 | RNAseq | 0.0048 | 0.9598 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ZNF90 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ZNF90:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZNF90 | 7643 | 2 | 5 | 23 | |
| GSE20123 | ZNF90 | 7643 | 2 | 3 | 25 | |
| GSE43470 | ZNF90 | 7643 | 2 | 6 | 35 | |
| GSE46452 | ZNF90 | 7643 | 47 | 1 | 11 | |
| GSE47630 | ZNF90 | 7643 | 5 | 8 | 27 | |
| GSE54993 | ZNF90 | 7643 | 17 | 3 | 50 | |
| GSE54994 | ZNF90 | 7643 | 6 | 13 | 34 | |
| GSE60625 | ZNF90 | 7643 | 9 | 0 | 2 | |
| GSE74703 | ZNF90 | 7643 | 2 | 4 | 30 | |
| GSE74704 | ZNF90 | 7643 | 0 | 3 | 17 | |
| TCGA | ZNF90 | 7643 | 16 | 12 | 68 |
Total number of gains: 108; Total number of losses: 58; Total Number of normals: 322.
Somatic mutations of ZNF90:
Generating mutation plots.
Highly correlated genes for ZNF90:
Showing top 20/60 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZNF90 | ZNF92 | 0.830791 | 3 | 0 | 3 |
| ZNF90 | APOBR | 0.775881 | 3 | 0 | 3 |
| ZNF90 | ZNF729 | 0.770974 | 3 | 0 | 3 |
| ZNF90 | ZNF727 | 0.763845 | 3 | 0 | 3 |
| ZNF90 | CLEC4A | 0.76 | 3 | 0 | 3 |
| ZNF90 | ZNF735 | 0.745169 | 3 | 0 | 3 |
| ZNF90 | ATG7 | 0.731202 | 3 | 0 | 3 |
| ZNF90 | ZNF141 | 0.727815 | 4 | 0 | 3 |
| ZNF90 | ZNF721 | 0.723395 | 3 | 0 | 3 |
| ZNF90 | B3GNT4 | 0.711121 | 3 | 0 | 3 |
| ZNF90 | CCR2 | 0.708456 | 3 | 0 | 3 |
| ZNF90 | DHODH | 0.706326 | 3 | 0 | 3 |
| ZNF90 | PIK3CB | 0.704854 | 3 | 0 | 3 |
| ZNF90 | ST6GALNAC4 | 0.704547 | 3 | 0 | 3 |
| ZNF90 | ZNF676 | 0.703842 | 4 | 0 | 3 |
| ZNF90 | MRPS22 | 0.702413 | 3 | 0 | 3 |
| ZNF90 | CCDC65 | 0.698264 | 3 | 0 | 3 |
| ZNF90 | SELPLG | 0.697157 | 4 | 0 | 3 |
| ZNF90 | CYLD | 0.687788 | 3 | 0 | 3 |
| ZNF90 | RPL24 | 0.686049 | 3 | 0 | 3 |
For details and further investigation, click here
