| Full name: ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 | Alias Symbol: bA301J7.2|FLJ00312 | ||
| Type: protein-coding gene | Cytoband: 10q11.22 | ||
| Entrez ID: 642517 | HGNC ID: HGNC:23463 | Ensembl Gene: ENSG00000204172 | OMIM ID: |
Expression of AGAP9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | AGAP9 | 642517 | 240230_s_at | -0.0056 | 0.9875 | |
| GSE26886 | AGAP9 | 642517 | 240230_s_at | -0.0413 | 0.8346 | |
| GSE45670 | AGAP9 | 642517 | 240230_s_at | 0.1218 | 0.4793 | |
| GSE63941 | AGAP9 | 642517 | 240230_s_at | -0.4774 | 0.0678 | |
| GSE77861 | AGAP9 | 642517 | 240230_s_at | 0.0558 | 0.7722 | |
| SRP133303 | AGAP9 | 642517 | RNAseq | -0.5904 | 0.3155 | |
| SRP159526 | AGAP9 | 642517 | RNAseq | -1.3114 | 0.5280 | |
| SRP219564 | AGAP9 | 642517 | RNAseq | 0.1992 | 0.8403 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of AGAP9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | AGAP9 | 642517 | 3 | 5 | 22 | |
| GSE20123 | AGAP9 | 642517 | 3 | 5 | 22 | |
| GSE43470 | AGAP9 | 642517 | 2 | 6 | 35 | |
| GSE46452 | AGAP9 | 642517 | 0 | 13 | 46 | |
| GSE47630 | AGAP9 | 642517 | 4 | 13 | 23 | |
| GSE54993 | AGAP9 | 642517 | 9 | 0 | 61 | |
| GSE54994 | AGAP9 | 642517 | 2 | 10 | 41 | |
| GSE60625 | AGAP9 | 642517 | 0 | 0 | 11 | |
| GSE74703 | AGAP9 | 642517 | 2 | 3 | 31 | |
| GSE74704 | AGAP9 | 642517 | 2 | 4 | 14 | |
| TCGA | AGAP9 | 642517 | 16 | 18 | 62 |
Total number of gains: 43; Total number of losses: 77; Total Number of normals: 368.
Somatic mutations of AGAP9:
Generating mutation plots.
Highly correlated genes for AGAP9:
Showing all 15 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| AGAP9 | EBLN2 | 0.627848 | 3 | 0 | 3 |
| AGAP9 | MZT2B | 0.581738 | 4 | 0 | 4 |
| AGAP9 | ANKRD36B | 0.562214 | 4 | 0 | 3 |
| AGAP9 | SSBP3-AS1 | 0.554996 | 4 | 0 | 3 |
| AGAP9 | PODNL1 | 0.550194 | 4 | 0 | 3 |
| AGAP9 | DLGAP4 | 0.548552 | 4 | 0 | 3 |
| AGAP9 | GPR1 | 0.545204 | 4 | 0 | 3 |
| AGAP9 | AGAP4 | 0.536574 | 5 | 0 | 3 |
| AGAP9 | DIP2A | 0.526271 | 5 | 0 | 3 |
| AGAP9 | FAM161B | 0.523692 | 5 | 0 | 3 |
| AGAP9 | ZNF638 | 0.518939 | 4 | 0 | 3 |
| AGAP9 | ANKRD12 | 0.51819 | 4 | 0 | 3 |
| AGAP9 | SYMPK | 0.511764 | 4 | 0 | 3 |
| AGAP9 | MALAT1 | 0.511135 | 5 | 0 | 3 |
| AGAP9 | ARHGEF1 | 0.505707 | 5 | 0 | 3 |
For details and further investigation, click here
