| Full name: archain 1 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 11q23.3 | ||
| Entrez ID: 372 | HGNC ID: HGNC:649 | Ensembl Gene: ENSG00000095139 | OMIM ID: 600820 |
| Drug and gene relationship at DGIdb | |||
Expression of ARCN1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ARCN1 | 372 | 201176_s_at | -0.0840 | 0.7739 | |
| GSE20347 | ARCN1 | 372 | 201176_s_at | -0.4079 | 0.0015 | |
| GSE23400 | ARCN1 | 372 | 201176_s_at | 0.0094 | 0.8979 | |
| GSE26886 | ARCN1 | 372 | 201176_s_at | -0.8862 | 0.0033 | |
| GSE29001 | ARCN1 | 372 | 201176_s_at | -0.3181 | 0.3107 | |
| GSE38129 | ARCN1 | 372 | 201176_s_at | -0.2724 | 0.0050 | |
| GSE45670 | ARCN1 | 372 | 201176_s_at | -0.0286 | 0.8562 | |
| GSE53622 | ARCN1 | 372 | 15784 | -0.0180 | 0.7542 | |
| GSE53624 | ARCN1 | 372 | 100190 | -0.1440 | 0.0103 | |
| GSE63941 | ARCN1 | 372 | 201176_s_at | -0.8839 | 0.0232 | |
| GSE77861 | ARCN1 | 372 | 201176_s_at | 0.0317 | 0.9075 | |
| GSE97050 | ARCN1 | 372 | A_33_P3356216 | 0.1914 | 0.5375 | |
| SRP007169 | ARCN1 | 372 | RNAseq | -0.0120 | 0.9728 | |
| SRP008496 | ARCN1 | 372 | RNAseq | 0.1527 | 0.4266 | |
| SRP064894 | ARCN1 | 372 | RNAseq | -0.1487 | 0.2962 | |
| SRP133303 | ARCN1 | 372 | RNAseq | 0.0502 | 0.7443 | |
| SRP159526 | ARCN1 | 372 | RNAseq | -0.2102 | 0.5036 | |
| SRP193095 | ARCN1 | 372 | RNAseq | -0.3961 | 0.0042 | |
| SRP219564 | ARCN1 | 372 | RNAseq | -0.2464 | 0.2994 | |
| TCGA | ARCN1 | 372 | RNAseq | -0.1028 | 0.0093 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ARCN1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ARCN1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ARCN1 | 372 | 2 | 11 | 17 | |
| GSE20123 | ARCN1 | 372 | 2 | 11 | 17 | |
| GSE43470 | ARCN1 | 372 | 2 | 9 | 32 | |
| GSE46452 | ARCN1 | 372 | 3 | 26 | 30 | |
| GSE47630 | ARCN1 | 372 | 2 | 19 | 19 | |
| GSE54993 | ARCN1 | 372 | 10 | 0 | 60 | |
| GSE54994 | ARCN1 | 372 | 5 | 19 | 29 | |
| GSE60625 | ARCN1 | 372 | 0 | 3 | 8 | |
| GSE74703 | ARCN1 | 372 | 1 | 6 | 29 | |
| GSE74704 | ARCN1 | 372 | 1 | 7 | 12 | |
| TCGA | ARCN1 | 372 | 4 | 51 | 41 |
Total number of gains: 32; Total number of losses: 162; Total Number of normals: 294.
Somatic mutations of ARCN1:
Generating mutation plots.
Highly correlated genes for ARCN1:
Showing top 20/594 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ARCN1 | FOPNL | 0.771014 | 3 | 0 | 3 |
| ARCN1 | SLC35D2 | 0.767162 | 3 | 0 | 3 |
| ARCN1 | ZBTB44 | 0.765115 | 3 | 0 | 3 |
| ARCN1 | CCNYL1 | 0.746902 | 3 | 0 | 3 |
| ARCN1 | TET2 | 0.730289 | 3 | 0 | 3 |
| ARCN1 | PSMD8 | 0.724669 | 4 | 0 | 4 |
| ARCN1 | DNAJB9 | 0.72412 | 3 | 0 | 3 |
| ARCN1 | MORC4 | 0.720164 | 3 | 0 | 3 |
| ARCN1 | PTGR1 | 0.719614 | 3 | 0 | 3 |
| ARCN1 | PSMD10 | 0.719007 | 4 | 0 | 4 |
| ARCN1 | SUFU | 0.718635 | 3 | 0 | 3 |
| ARCN1 | TAB3 | 0.709626 | 3 | 0 | 3 |
| ARCN1 | SPOP | 0.707828 | 3 | 0 | 3 |
| ARCN1 | SLC30A6 | 0.707373 | 4 | 0 | 3 |
| ARCN1 | LRRFIP2 | 0.704758 | 6 | 0 | 6 |
| ARCN1 | TMEM19 | 0.700469 | 3 | 0 | 3 |
| ARCN1 | STT3B | 0.696039 | 5 | 0 | 5 |
| ARCN1 | SLC35B3 | 0.695715 | 3 | 0 | 3 |
| ARCN1 | WDR77 | 0.692837 | 3 | 0 | 3 |
| ARCN1 | CMAS | 0.69182 | 5 | 0 | 5 |
For details and further investigation, click here
