PSMD8

 

Full name: proteasome 26S subunit, non-ATPase 8 Alias Symbol: S14|Nin1p|p31|HIP6|HYPF|Rpn12
Type: protein-coding gene Cytoband: 19q13.2
Entrez ID: 5714 HGNC ID: HGNC:9566 Ensembl Gene: ENSG00000099341 OMIM ID: 617844
Drug and gene relationship at DGIdb

 

Expression of PSMD8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PSMD8 5714 200820_at -0.1575 0.5458
GSE20347 PSMD8 5714 200820_at -0.1465 0.3684
GSE23400 PSMD8 5714 200820_at 0.0778 0.3332
GSE26886 PSMD8 5714 200820_at -0.5336 0.0028
GSE29001 PSMD8 5714 200820_at -0.3194 0.3547
GSE38129 PSMD8 5714 200820_at 0.1398 0.3166
GSE45670 PSMD8 5714 200820_at -0.0180 0.9287
GSE53622 PSMD8 5714 63861 0.2069 0.0075
GSE53624 PSMD8 5714 63861 0.2289 0.0001
GSE63941 PSMD8 5714 200820_at 0.2088 0.7055
GSE77861 PSMD8 5714 200820_at 0.2179 0.3039
GSE97050 PSMD8 5714 A_23_P67466 0.1673 0.4585
SRP007169 PSMD8 5714 RNAseq -0.3176 0.5190
SRP008496 PSMD8 5714 RNAseq -0.6109 0.0425
SRP064894 PSMD8 5714 RNAseq 0.3422 0.1994
SRP133303 PSMD8 5714 RNAseq 0.5513 0.0203
SRP159526 PSMD8 5714 RNAseq 0.2212 0.2664
SRP193095 PSMD8 5714 RNAseq -0.2251 0.0752
SRP219564 PSMD8 5714 RNAseq -0.1825 0.5644
TCGA PSMD8 5714 RNAseq 0.1099 0.0211

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by PSMD8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PSMD8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PSMD8 5714 7 4 19
GSE20123 PSMD8 5714 7 3 20
GSE43470 PSMD8 5714 4 10 29
GSE46452 PSMD8 5714 47 2 10
GSE47630 PSMD8 5714 9 5 26
GSE54993 PSMD8 5714 17 3 50
GSE54994 PSMD8 5714 6 9 38
GSE60625 PSMD8 5714 9 0 2
GSE74703 PSMD8 5714 4 6 26
GSE74704 PSMD8 5714 7 1 12
TCGA PSMD8 5714 16 15 65

Total number of gains: 133; Total number of losses: 58; Total Number of normals: 297.  


 

Somatic mutations of PSMD8:

 

Generating mutation plots.

 

Highly correlated genes for PSMD8:

 

Showing top 20/398 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PSMD8FBXL50.82309303
PSMD8NAGA0.798649303
PSMD8HERPUD10.786122303
PSMD8VPS250.776186303
PSMD8CCNI0.770487303
PSMD8ELF10.766753303
PSMD8SORL10.744455303
PSMD8VDAC30.743882303
PSMD8RPL190.741246303
PSMD8SUCLG20.740135303
PSMD8TRAM10.734021303
PSMD8UBE2J10.732775404
PSMD8TNKS20.732635303
PSMD8SCAMP20.731096303
PSMD8RBM30.728406303
PSMD8ARCN10.724669404
PSMD8PLEKHM10.724175303
PSMD8SEC24D0.723029303
PSMD8TMEM1650.719234303
PSMD8FUCA10.717224303

For details and further investigation, click here