PTGR1

 

Full name: prostaglandin reductase 1 Alias Symbol: ZADH3
Type: protein-coding gene Cytoband: 9q31.3
Entrez ID: 22949 HGNC ID: HGNC:18429 Ensembl Gene: ENSG00000106853 OMIM ID: 601274
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of PTGR1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PTGR1 22949 231897_at -1.9353 0.1351
GSE26886 PTGR1 22949 231897_at -1.8894 0.0000
GSE45670 PTGR1 22949 231897_at -0.5216 0.1535
GSE53622 PTGR1 22949 146055 -1.3349 0.0000
GSE53624 PTGR1 22949 146055 -1.1848 0.0000
GSE63941 PTGR1 22949 231897_at -1.2568 0.5393
GSE77861 PTGR1 22949 231897_at -0.9178 0.2440
GSE97050 PTGR1 22949 A_33_P3396444 -0.5318 0.1260
SRP007169 PTGR1 22949 RNAseq -0.7414 0.2794
SRP008496 PTGR1 22949 RNAseq -0.2157 0.6398
SRP064894 PTGR1 22949 RNAseq -1.1142 0.0001
SRP133303 PTGR1 22949 RNAseq -2.0094 0.0000
SRP159526 PTGR1 22949 RNAseq -0.6027 0.2183
SRP193095 PTGR1 22949 RNAseq -0.6892 0.0766
SRP219564 PTGR1 22949 RNAseq -0.6851 0.3852
TCGA PTGR1 22949 RNAseq -0.0989 0.4292

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by PTGR1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PTGR1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PTGR1 22949 5 8 17
GSE20123 PTGR1 22949 5 7 18
GSE43470 PTGR1 22949 4 3 36
GSE46452 PTGR1 22949 6 13 40
GSE47630 PTGR1 22949 3 16 21
GSE54993 PTGR1 22949 3 3 64
GSE54994 PTGR1 22949 9 10 34
GSE60625 PTGR1 22949 0 0 11
GSE74703 PTGR1 22949 4 3 29
GSE74704 PTGR1 22949 2 6 12
TCGA PTGR1 22949 26 21 49

Total number of gains: 67; Total number of losses: 90; Total Number of normals: 331.  


 

Somatic mutations of PTGR1:

 

Generating mutation plots.

 

Highly correlated genes for PTGR1:

 

Showing top 20/991 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PTGR1MCTS10.849255303
PTGR1PKN20.813787303
PTGR1TOM1L10.791847303
PTGR1PGD0.779952707
PTGR1CYP4F30.766784707
PTGR1UBE2D20.761782404
PTGR1UGP20.760982505
PTGR1SDHC0.757787303
PTGR1HIBCH0.752779303
PTGR1ZNF585A0.749216303
PTGR1RBX10.743982303
PTGR1ALDOC0.739504303
PTGR1ACAA10.736359303
PTGR1IMPACT0.733635303
PTGR1CCNYL10.733452403
PTGR1APC0.732702303
PTGR1KLF30.728646606
PTGR1PRDM20.727677303
PTGR1SECISBP2L0.727497403
PTGR1ALDH3A20.725677808

For details and further investigation, click here