C10orf62

 

Full name: chromosome 10 open reading frame 62 Alias Symbol: bA548K23.1
Type: protein-coding gene Cytoband: 10q24.2
Entrez ID: 414157 HGNC ID: HGNC:23294 Ensembl Gene: ENSG00000203942 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C10orf62:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C10orf62 414157 240235_at 0.0226 0.9342
GSE26886 C10orf62 414157 240235_at -0.0533 0.6573
GSE45670 C10orf62 414157 240235_at 0.1060 0.1858
GSE53622 C10orf62 414157 75257 -0.1132 0.4557
GSE53624 C10orf62 414157 75257 -0.2966 0.1285
GSE63941 C10orf62 414157 240235_at 0.2706 0.0203
GSE77861 C10orf62 414157 240235_at -0.1219 0.3999
TCGA C10orf62 414157 RNAseq 0.6259 0.4475

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C10orf62 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C10orf62:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C10orf62 414157 1 8 21
GSE20123 C10orf62 414157 1 7 22
GSE43470 C10orf62 414157 0 7 36
GSE46452 C10orf62 414157 0 11 48
GSE47630 C10orf62 414157 2 14 24
GSE54993 C10orf62 414157 8 0 62
GSE54994 C10orf62 414157 2 11 40
GSE60625 C10orf62 414157 0 0 11
GSE74703 C10orf62 414157 0 5 31
GSE74704 C10orf62 414157 0 4 16
TCGA C10orf62 414157 5 28 63

Total number of gains: 19; Total number of losses: 95; Total Number of normals: 374.  


 

Somatic mutations of C10orf62:

 

Generating mutation plots.

 

Highly correlated genes for C10orf62:

 

Showing top 20/58 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C10orf62MIOX0.679485303
C10orf62DCST10.67329403
C10orf62OR2H10.655594303
C10orf62SLC32A10.654732303
C10orf62LINC008960.651268303
C10orf62OLIG30.647065303
C10orf62CATSPERG0.642746303
C10orf62NPHS20.634903303
C10orf62LINC008870.63039303
C10orf62PAQR90.626463303
C10orf62DLGAP30.623567504
C10orf62CCDC1540.615901403
C10orf62KRTAP4-80.609657403
C10orf62OR11A10.60853403
C10orf62GPHA20.599129403
C10orf62TTTY110.596938404
C10orf62TAS2R380.594516303
C10orf62PPP1R170.585456403
C10orf62C1orf1270.585317303
C10orf62APOH0.58079303

For details and further investigation, click here