| Full name: long intergenic non-protein coding RNA 896 | Alias Symbol: FLJ32575 | ||
| Type: non-coding RNA | Cytoband: 22q11.21 | ||
| Entrez ID: 150197 | HGNC ID: HGNC:26519 | Ensembl Gene: ENSG00000236499 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00896:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00896 | 150197 | 1553658_at | 0.0717 | 0.8482 | |
| GSE26886 | LINC00896 | 150197 | 1553658_at | -0.0613 | 0.5769 | |
| GSE45670 | LINC00896 | 150197 | 1553658_at | 0.0259 | 0.7842 | |
| GSE53622 | LINC00896 | 150197 | 95944 | 0.3835 | 0.0305 | |
| GSE53624 | LINC00896 | 150197 | 95944 | 0.1930 | 0.1809 | |
| GSE63941 | LINC00896 | 150197 | 1553658_at | 0.0510 | 0.7336 | |
| GSE77861 | LINC00896 | 150197 | 1553658_at | -0.2126 | 0.0886 | |
| SRP133303 | LINC00896 | 150197 | RNAseq | -0.0787 | 0.8841 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00896 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00896:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00896 | 150197 | 5 | 7 | 18 | |
| GSE20123 | LINC00896 | 150197 | 5 | 7 | 18 | |
| GSE43470 | LINC00896 | 150197 | 4 | 7 | 32 | |
| GSE46452 | LINC00896 | 150197 | 33 | 1 | 25 | |
| GSE47630 | LINC00896 | 150197 | 8 | 5 | 27 | |
| GSE54993 | LINC00896 | 150197 | 3 | 6 | 61 | |
| GSE54994 | LINC00896 | 150197 | 12 | 7 | 34 | |
| GSE60625 | LINC00896 | 150197 | 5 | 0 | 6 | |
| GSE74703 | LINC00896 | 150197 | 4 | 5 | 27 | |
| GSE74704 | LINC00896 | 150197 | 3 | 4 | 13 |
Total number of gains: 82; Total number of losses: 49; Total Number of normals: 261.
Somatic mutations of LINC00896:
Generating mutation plots.
Highly correlated genes for LINC00896:
Showing top 20/39 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00896 | TMEM235 | 0.679504 | 3 | 0 | 3 |
| LINC00896 | C16orf92 | 0.678239 | 3 | 0 | 3 |
| LINC00896 | C10orf62 | 0.651268 | 3 | 0 | 3 |
| LINC00896 | OPTC | 0.625598 | 3 | 0 | 3 |
| LINC00896 | APOBEC2 | 0.625552 | 3 | 0 | 3 |
| LINC00896 | MROH2A | 0.619946 | 3 | 0 | 3 |
| LINC00896 | OR1A2 | 0.619562 | 3 | 0 | 3 |
| LINC00896 | CALY | 0.614548 | 3 | 0 | 3 |
| LINC00896 | TTTY11 | 0.612085 | 3 | 0 | 3 |
| LINC00896 | SLC22A25 | 0.602815 | 3 | 0 | 3 |
| LINC00896 | RXFP3 | 0.598407 | 3 | 0 | 3 |
| LINC00896 | SLC6A19 | 0.594669 | 3 | 0 | 3 |
| LINC00896 | LTK | 0.59077 | 4 | 0 | 3 |
| LINC00896 | UBAC2-AS1 | 0.586494 | 3 | 0 | 3 |
| LINC00896 | HDGFL1 | 0.586074 | 3 | 0 | 3 |
| LINC00896 | TNNI1 | 0.579296 | 3 | 0 | 3 |
| LINC00896 | AQP6 | 0.577814 | 4 | 0 | 3 |
| LINC00896 | EPOR | 0.57369 | 4 | 0 | 3 |
| LINC00896 | TTTY12 | 0.572145 | 3 | 0 | 3 |
| LINC00896 | VGLL2 | 0.566562 | 3 | 0 | 3 |
For details and further investigation, click here
