| Full name: chromosome 19 open reading frame 71 | Alias Symbol: LOC100128569 | ||
| Type: protein-coding gene | Cytoband: 19p13.3 | ||
| Entrez ID: 100128569 | HGNC ID: HGNC:34496 | Ensembl Gene: ENSG00000183397 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C19orf71:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | C19orf71 | 100128569 | 67601 | 0.1296 | 0.0694 | |
| GSE53624 | C19orf71 | 100128569 | 67601 | 0.2595 | 0.0001 | |
| GSE97050 | C19orf71 | 100128569 | A_24_P247286 | -0.0081 | 0.9727 | |
| SRP064894 | C19orf71 | 100128569 | RNAseq | 0.3800 | 0.1645 | |
| SRP133303 | C19orf71 | 100128569 | RNAseq | 0.0416 | 0.8420 | |
| SRP159526 | C19orf71 | 100128569 | RNAseq | 0.0928 | 0.7903 | |
| SRP193095 | C19orf71 | 100128569 | RNAseq | 0.9531 | 0.0000 | |
| SRP219564 | C19orf71 | 100128569 | RNAseq | 0.6879 | 0.2192 | |
| TCGA | C19orf71 | 100128569 | RNAseq | -0.1283 | 0.4727 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C19orf71 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C19orf71:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C19orf71 | 100128569 | 5 | 4 | 21 | |
| GSE20123 | C19orf71 | 100128569 | 4 | 3 | 23 | |
| GSE43470 | C19orf71 | 100128569 | 1 | 9 | 33 | |
| GSE46452 | C19orf71 | 100128569 | 47 | 1 | 11 | |
| GSE47630 | C19orf71 | 100128569 | 5 | 7 | 28 | |
| GSE54993 | C19orf71 | 100128569 | 16 | 3 | 51 | |
| GSE54994 | C19orf71 | 100128569 | 8 | 16 | 29 | |
| GSE60625 | C19orf71 | 100128569 | 9 | 0 | 2 | |
| GSE74703 | C19orf71 | 100128569 | 1 | 6 | 29 | |
| GSE74704 | C19orf71 | 100128569 | 1 | 3 | 16 | |
| TCGA | C19orf71 | 100128569 | 10 | 19 | 67 |
Total number of gains: 107; Total number of losses: 71; Total Number of normals: 310.
Somatic mutations of C19orf71:
Generating mutation plots.
Highly correlated genes for C19orf71:
Showing top 20/201 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C19orf71 | PRLH | 0.82659 | 3 | 0 | 3 |
| C19orf71 | PRDM13 | 0.826488 | 3 | 0 | 3 |
| C19orf71 | NKX6-3 | 0.821759 | 3 | 0 | 3 |
| C19orf71 | SERPINA10 | 0.818925 | 3 | 0 | 3 |
| C19orf71 | RASL10B | 0.818541 | 3 | 0 | 3 |
| C19orf71 | TMEM235 | 0.818445 | 3 | 0 | 3 |
| C19orf71 | FBRSL1 | 0.81706 | 3 | 0 | 3 |
| C19orf71 | NPPB | 0.816792 | 3 | 0 | 3 |
| C19orf71 | FFAR1 | 0.81406 | 3 | 0 | 3 |
| C19orf71 | MRGPRG | 0.813974 | 3 | 0 | 3 |
| C19orf71 | CNOT3 | 0.811806 | 3 | 0 | 3 |
| C19orf71 | SHISA7 | 0.807197 | 3 | 0 | 3 |
| C19orf71 | SLC6A3 | 0.807018 | 3 | 0 | 3 |
| C19orf71 | SLC26A1 | 0.804885 | 3 | 0 | 3 |
| C19orf71 | GRIK4 | 0.804404 | 3 | 0 | 3 |
| C19orf71 | FOXE3 | 0.803725 | 3 | 0 | 3 |
| C19orf71 | KCNH3 | 0.803663 | 3 | 0 | 3 |
| C19orf71 | WDR87 | 0.801578 | 3 | 0 | 3 |
| C19orf71 | CHST10 | 0.801074 | 3 | 0 | 3 |
| C19orf71 | C2CD4D | 0.798971 | 3 | 0 | 3 |
For details and further investigation, click here
