| Full name: chromosome 2 open reading frame 42 | Alias Symbol: FLJ20558 | ||
| Type: protein-coding gene | Cytoband: 2p13.3 | ||
| Entrez ID: 54980 | HGNC ID: HGNC:26056 | Ensembl Gene: ENSG00000115998 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C2orf42:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C2orf42 | 54980 | 219128_at | -0.2664 | 0.4479 | |
| GSE20347 | C2orf42 | 54980 | 219128_at | 0.0538 | 0.6616 | |
| GSE23400 | C2orf42 | 54980 | 219128_at | 0.0238 | 0.5729 | |
| GSE26886 | C2orf42 | 54980 | 219128_at | -0.1944 | 0.5083 | |
| GSE29001 | C2orf42 | 54980 | 219128_at | -0.0061 | 0.9817 | |
| GSE38129 | C2orf42 | 54980 | 219128_at | 0.0429 | 0.6699 | |
| GSE45670 | C2orf42 | 54980 | 219128_at | 0.0901 | 0.5463 | |
| GSE53622 | C2orf42 | 54980 | 44924 | 0.1706 | 0.0115 | |
| GSE53624 | C2orf42 | 54980 | 44924 | 0.0747 | 0.1881 | |
| GSE63941 | C2orf42 | 54980 | 219128_at | 0.2335 | 0.6416 | |
| GSE77861 | C2orf42 | 54980 | 219128_at | 0.1331 | 0.4068 | |
| GSE97050 | C2orf42 | 54980 | A_23_P79441 | 0.2330 | 0.3049 | |
| SRP007169 | C2orf42 | 54980 | RNAseq | -0.1140 | 0.7605 | |
| SRP008496 | C2orf42 | 54980 | RNAseq | -0.2148 | 0.4663 | |
| SRP064894 | C2orf42 | 54980 | RNAseq | 0.0954 | 0.4756 | |
| SRP133303 | C2orf42 | 54980 | RNAseq | 0.2184 | 0.0272 | |
| SRP159526 | C2orf42 | 54980 | RNAseq | 0.5130 | 0.0294 | |
| SRP193095 | C2orf42 | 54980 | RNAseq | 0.2486 | 0.0049 | |
| SRP219564 | C2orf42 | 54980 | RNAseq | -0.1154 | 0.6729 | |
| TCGA | C2orf42 | 54980 | RNAseq | 0.0003 | 0.9963 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C2orf42 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C2orf42:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C2orf42 | 54980 | 11 | 1 | 18 | |
| GSE20123 | C2orf42 | 54980 | 11 | 1 | 18 | |
| GSE43470 | C2orf42 | 54980 | 3 | 0 | 40 | |
| GSE46452 | C2orf42 | 54980 | 2 | 3 | 54 | |
| GSE47630 | C2orf42 | 54980 | 7 | 0 | 33 | |
| GSE54993 | C2orf42 | 54980 | 0 | 6 | 64 | |
| GSE54994 | C2orf42 | 54980 | 11 | 0 | 42 | |
| GSE60625 | C2orf42 | 54980 | 0 | 3 | 8 | |
| GSE74703 | C2orf42 | 54980 | 3 | 0 | 33 | |
| GSE74704 | C2orf42 | 54980 | 9 | 1 | 10 | |
| TCGA | C2orf42 | 54980 | 36 | 2 | 58 |
Total number of gains: 93; Total number of losses: 17; Total Number of normals: 378.
Somatic mutations of C2orf42:
Generating mutation plots.
Highly correlated genes for C2orf42:
Showing top 20/133 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C2orf42 | KRCC1 | 0.752274 | 3 | 0 | 3 |
| C2orf42 | RSRC2 | 0.746329 | 4 | 0 | 4 |
| C2orf42 | TCTEX1D2 | 0.730712 | 3 | 0 | 3 |
| C2orf42 | FAM120AOS | 0.726662 | 3 | 0 | 3 |
| C2orf42 | ATG14 | 0.721534 | 3 | 0 | 3 |
| C2orf42 | KLHL15 | 0.699305 | 3 | 0 | 3 |
| C2orf42 | ZMIZ1 | 0.699173 | 3 | 0 | 3 |
| C2orf42 | IFNAR1 | 0.697889 | 3 | 0 | 3 |
| C2orf42 | OSBPL9 | 0.692928 | 3 | 0 | 3 |
| C2orf42 | WIPF2 | 0.687911 | 3 | 0 | 3 |
| C2orf42 | PSMA5 | 0.685049 | 3 | 0 | 3 |
| C2orf42 | RBM39 | 0.684681 | 3 | 0 | 3 |
| C2orf42 | SPPL2A | 0.676402 | 3 | 0 | 3 |
| C2orf42 | ZC3HC1 | 0.675383 | 3 | 0 | 3 |
| C2orf42 | HK1 | 0.674641 | 4 | 0 | 3 |
| C2orf42 | SKAP2 | 0.670249 | 3 | 0 | 3 |
| C2orf42 | RRAGB | 0.670107 | 3 | 0 | 3 |
| C2orf42 | FDXACB1 | 0.66379 | 3 | 0 | 3 |
| C2orf42 | CHURC1 | 0.656566 | 3 | 0 | 3 |
| C2orf42 | SPG11 | 0.650462 | 4 | 0 | 3 |
For details and further investigation, click here
