| Full name: cancer susceptibility 18 | Alias Symbol: LOC101929110 | ||
| Type: non-coding RNA | Cytoband: 12q23.3 | ||
| Entrez ID: 101929110 | HGNC ID: HGNC:49463 | Ensembl Gene: ENSG00000257859 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CASC18:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CASC18 | 101929110 | 233190_at | -0.1191 | 0.5682 | |
| GSE26886 | CASC18 | 101929110 | 233190_at | 0.3092 | 0.0580 | |
| GSE45670 | CASC18 | 101929110 | 233190_at | -0.0530 | 0.5174 | |
| GSE53622 | CASC18 | 101929110 | 47385 | 0.1443 | 0.1338 | |
| GSE53624 | CASC18 | 101929110 | 47385 | -0.2627 | 0.0453 | |
| GSE63941 | CASC18 | 101929110 | 233190_at | 0.0201 | 0.8960 | |
| GSE77861 | CASC18 | 101929110 | 233190_at | -0.1455 | 0.0855 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CASC18 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CASC18:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CASC18 | 101929110 | 6 | 2 | 22 | |
| GSE20123 | CASC18 | 101929110 | 6 | 2 | 22 | |
| GSE43470 | CASC18 | 101929110 | 2 | 0 | 41 | |
| GSE46452 | CASC18 | 101929110 | 9 | 1 | 49 | |
| GSE47630 | CASC18 | 101929110 | 9 | 1 | 30 | |
| GSE54993 | CASC18 | 101929110 | 0 | 5 | 65 | |
| GSE54994 | CASC18 | 101929110 | 4 | 2 | 47 | |
| GSE60625 | CASC18 | 101929110 | 0 | 0 | 11 | |
| GSE74703 | CASC18 | 101929110 | 2 | 0 | 34 | |
| GSE74704 | CASC18 | 101929110 | 3 | 2 | 15 |
Total number of gains: 41; Total number of losses: 15; Total Number of normals: 336.
Somatic mutations of CASC18:
Generating mutation plots.
Highly correlated genes for CASC18:
Showing top 20/69 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CASC18 | IQCF2 | 0.717721 | 3 | 0 | 3 |
| CASC18 | SLC22A31 | 0.704121 | 3 | 0 | 3 |
| CASC18 | CREB3L3 | 0.697015 | 3 | 0 | 3 |
| CASC18 | KDM8 | 0.685662 | 3 | 0 | 3 |
| CASC18 | SERPINA10 | 0.66244 | 3 | 0 | 3 |
| CASC18 | SLC32A1 | 0.657299 | 4 | 0 | 3 |
| CASC18 | DEFB108B | 0.653452 | 4 | 0 | 4 |
| CASC18 | TRIM10 | 0.653005 | 3 | 0 | 3 |
| CASC18 | WDR87 | 0.652197 | 3 | 0 | 3 |
| CASC18 | FGB | 0.64942 | 3 | 0 | 3 |
| CASC18 | GJD4 | 0.647846 | 3 | 0 | 3 |
| CASC18 | LINC01282 | 0.641961 | 3 | 0 | 3 |
| CASC18 | NOBOX | 0.641067 | 3 | 0 | 3 |
| CASC18 | CCDC154 | 0.638769 | 4 | 0 | 4 |
| CASC18 | MMP19 | 0.636718 | 3 | 0 | 3 |
| CASC18 | PSPN | 0.634883 | 3 | 0 | 3 |
| CASC18 | RBBP8NL | 0.634759 | 3 | 0 | 3 |
| CASC18 | SLC26A1 | 0.634593 | 3 | 0 | 3 |
| CASC18 | RAPGEF3 | 0.630618 | 3 | 0 | 3 |
| CASC18 | KIF25 | 0.629079 | 3 | 0 | 3 |
For details and further investigation, click here
