CCDC140

 

Full name: coiled-coil domain containing 140 Alias Symbol: FLJ32447
Type: protein-coding gene Cytoband: 2q36.1
Entrez ID: 151278 HGNC ID: HGNC:26514 Ensembl Gene: ENSG00000163081 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CCDC140:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC140 151278 1553485_at 0.0435 0.9177
GSE26886 CCDC140 151278 1553485_at 0.1589 0.2448
GSE45670 CCDC140 151278 1553485_at -0.0269 0.8042
GSE53622 CCDC140 151278 48524 0.1041 0.5613
GSE53624 CCDC140 151278 48524 0.8617 0.0000
GSE63941 CCDC140 151278 1553485_at 0.4521 0.0385
GSE77861 CCDC140 151278 1553485_at -0.0176 0.9102
TCGA CCDC140 151278 RNAseq 2.9015 0.0389

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CCDC140 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCDC140:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC140 151278 2 13 15
GSE20123 CCDC140 151278 2 13 15
GSE43470 CCDC140 151278 0 7 36
GSE46452 CCDC140 151278 0 5 54
GSE47630 CCDC140 151278 4 5 31
GSE54993 CCDC140 151278 1 2 67
GSE54994 CCDC140 151278 7 10 36
GSE60625 CCDC140 151278 3 0 8
GSE74703 CCDC140 151278 0 6 30
GSE74704 CCDC140 151278 2 7 11
TCGA CCDC140 151278 13 27 56

Total number of gains: 34; Total number of losses: 95; Total Number of normals: 359.  


 

Somatic mutations of CCDC140:

 

Generating mutation plots.

 

Highly correlated genes for CCDC140:

 

Showing top 20/35 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC140C14orf1780.721662303
CCDC140UCN30.700638403
CCDC140AK80.66913303
CCDC140MYCBPAP0.66539303
CCDC140CACNA1F0.660339303
CCDC140CACNG40.64998303
CCDC140USP2-AS10.649733303
CCDC140AMBN0.638542303
CCDC140CASC110.630522303
CCDC140RANBP3L0.626534303
CCDC140ATCAY0.626307404
CCDC140GLRA20.625829404
CCDC140GATA10.613974404
CCDC140PANX20.611016303
CCDC140GPR1350.604887303
CCDC140SLC5A20.594765303
CCDC140POM121L120.592851303
CCDC140VWA3A0.587862403
CCDC140GSC0.581985403
CCDC140GJD20.561104303

For details and further investigation, click here