| Full name: RAN binding protein 3 like | Alias Symbol: FLJ25422 | ||
| Type: protein-coding gene | Cytoband: 5p13.2 | ||
| Entrez ID: 202151 | HGNC ID: HGNC:26353 | Ensembl Gene: ENSG00000164188 | OMIM ID: 616391 |
| Drug and gene relationship at DGIdb | |||
Expression of RANBP3L:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RANBP3L | 202151 | 1553147_at | -0.0604 | 0.7814 | |
| GSE26886 | RANBP3L | 202151 | 1553147_at | 0.0045 | 0.9685 | |
| GSE45670 | RANBP3L | 202151 | 1553147_at | 0.0237 | 0.7256 | |
| GSE53622 | RANBP3L | 202151 | 65727 | -1.0903 | 0.0004 | |
| GSE53624 | RANBP3L | 202151 | 65727 | -0.8794 | 0.0000 | |
| GSE63941 | RANBP3L | 202151 | 1553147_at | 0.1301 | 0.3242 | |
| GSE77861 | RANBP3L | 202151 | 1553147_at | -0.0059 | 0.9568 | |
| GSE97050 | RANBP3L | 202151 | A_33_P3360072 | -0.6861 | 0.2641 | |
| SRP133303 | RANBP3L | 202151 | RNAseq | 1.0444 | 0.0699 | |
| SRP159526 | RANBP3L | 202151 | RNAseq | -0.3993 | 0.4807 | |
| TCGA | RANBP3L | 202151 | RNAseq | -2.6978 | 0.0002 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by RANBP3L expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RANBP3L:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RANBP3L | 202151 | 10 | 0 | 20 | |
| GSE20123 | RANBP3L | 202151 | 10 | 0 | 20 | |
| GSE43470 | RANBP3L | 202151 | 17 | 0 | 26 | |
| GSE46452 | RANBP3L | 202151 | 5 | 22 | 32 | |
| GSE47630 | RANBP3L | 202151 | 6 | 12 | 22 | |
| GSE54993 | RANBP3L | 202151 | 5 | 4 | 61 | |
| GSE54994 | RANBP3L | 202151 | 26 | 2 | 25 | |
| GSE60625 | RANBP3L | 202151 | 0 | 0 | 11 | |
| GSE74703 | RANBP3L | 202151 | 13 | 0 | 23 | |
| GSE74704 | RANBP3L | 202151 | 9 | 0 | 11 | |
| TCGA | RANBP3L | 202151 | 52 | 6 | 38 |
Total number of gains: 153; Total number of losses: 46; Total Number of normals: 289.
Somatic mutations of RANBP3L:
Generating mutation plots.
Highly correlated genes for RANBP3L:
Showing top 20/290 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RANBP3L | PLCB1 | 0.759475 | 3 | 0 | 3 |
| RANBP3L | PTH1R | 0.737928 | 4 | 0 | 4 |
| RANBP3L | SMAD9 | 0.722852 | 4 | 0 | 4 |
| RANBP3L | ZNF385D | 0.718303 | 4 | 0 | 4 |
| RANBP3L | ATP10A | 0.711895 | 4 | 0 | 3 |
| RANBP3L | LUZP4 | 0.708894 | 3 | 0 | 3 |
| RANBP3L | C3orf18 | 0.707348 | 4 | 0 | 4 |
| RANBP3L | LRRN4CL | 0.705095 | 4 | 0 | 4 |
| RANBP3L | TNFSF12 | 0.703872 | 3 | 0 | 3 |
| RANBP3L | AGTR1 | 0.701695 | 4 | 0 | 4 |
| RANBP3L | CYS1 | 0.701542 | 4 | 0 | 4 |
| RANBP3L | PRKAR2B | 0.691389 | 4 | 0 | 4 |
| RANBP3L | CKMT2 | 0.691071 | 4 | 0 | 4 |
| RANBP3L | RGN | 0.690397 | 3 | 0 | 3 |
| RANBP3L | MITF | 0.690207 | 4 | 0 | 4 |
| RANBP3L | ADAMTS5 | 0.689466 | 4 | 0 | 4 |
| RANBP3L | BHMT2 | 0.687256 | 4 | 0 | 3 |
| RANBP3L | CYP2U1 | 0.685356 | 5 | 0 | 5 |
| RANBP3L | LRCH2 | 0.685183 | 4 | 0 | 4 |
| RANBP3L | JAZF1 | 0.682589 | 4 | 0 | 4 |
For details and further investigation, click here
