| Full name: CIRBP antisense RNA 1 | Alias Symbol: MGC39338 | ||
| Type: non-coding RNA | Cytoband: 19p13.3 | ||
| Entrez ID: 148046 | HGNC ID: HGNC:28588 | Ensembl Gene: ENSG00000267493 | OMIM ID: |
Expression of CIRBP-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CIRBP-AS1 | 148046 | 1552868_at | 0.1173 | 0.6795 | |
| GSE26886 | CIRBP-AS1 | 148046 | 1552868_at | -0.0284 | 0.8527 | |
| GSE45670 | CIRBP-AS1 | 148046 | 1552868_at | 0.0891 | 0.3923 | |
| GSE63941 | CIRBP-AS1 | 148046 | 1552868_at | -0.1779 | 0.2923 | |
| GSE77861 | CIRBP-AS1 | 148046 | 239126_at | -0.0807 | 0.5652 | |
| SRP133303 | CIRBP-AS1 | 148046 | RNAseq | -0.3394 | 0.2490 | |
| SRP159526 | CIRBP-AS1 | 148046 | RNAseq | 0.4183 | 0.2900 | |
| SRP193095 | CIRBP-AS1 | 148046 | RNAseq | 0.0635 | 0.6332 | |
| SRP219564 | CIRBP-AS1 | 148046 | RNAseq | -0.8840 | 0.0700 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of CIRBP-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CIRBP-AS1 | 148046 | 4 | 6 | 20 | |
| GSE20123 | CIRBP-AS1 | 148046 | 4 | 5 | 21 | |
| GSE43470 | CIRBP-AS1 | 148046 | 1 | 11 | 31 | |
| GSE46452 | CIRBP-AS1 | 148046 | 47 | 1 | 11 | |
| GSE47630 | CIRBP-AS1 | 148046 | 5 | 7 | 28 | |
| GSE54993 | CIRBP-AS1 | 148046 | 13 | 4 | 53 | |
| GSE54994 | CIRBP-AS1 | 148046 | 8 | 15 | 30 | |
| GSE60625 | CIRBP-AS1 | 148046 | 9 | 0 | 2 | |
| GSE74703 | CIRBP-AS1 | 148046 | 1 | 8 | 27 | |
| GSE74704 | CIRBP-AS1 | 148046 | 3 | 3 | 14 |
Total number of gains: 95; Total number of losses: 60; Total Number of normals: 237.
Somatic mutations of CIRBP-AS1:
Generating mutation plots.
Highly correlated genes for CIRBP-AS1:
Showing all 19 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CIRBP-AS1 | FIZ1 | 0.652316 | 4 | 0 | 3 |
| CIRBP-AS1 | IRF2BP1 | 0.636954 | 3 | 0 | 3 |
| CIRBP-AS1 | DRP2 | 0.628339 | 3 | 0 | 3 |
| CIRBP-AS1 | SPATA24 | 0.608729 | 3 | 0 | 3 |
| CIRBP-AS1 | UCP1 | 0.588829 | 4 | 0 | 4 |
| CIRBP-AS1 | ICOSLG | 0.582465 | 3 | 0 | 3 |
| CIRBP-AS1 | PRSS58 | 0.576889 | 3 | 0 | 3 |
| CIRBP-AS1 | DMWD | 0.575178 | 4 | 0 | 3 |
| CIRBP-AS1 | TPBGL | 0.565084 | 3 | 0 | 3 |
| CIRBP-AS1 | NUCB1 | 0.549526 | 3 | 0 | 3 |
| CIRBP-AS1 | KCNK16 | 0.54828 | 4 | 0 | 3 |
| CIRBP-AS1 | LINC00167 | 0.543431 | 4 | 0 | 3 |
| CIRBP-AS1 | GRM2 | 0.543321 | 3 | 0 | 3 |
| CIRBP-AS1 | CNTD2 | 0.532695 | 4 | 0 | 3 |
| CIRBP-AS1 | GRINA | 0.527304 | 3 | 0 | 3 |
| CIRBP-AS1 | TTR | 0.522912 | 4 | 0 | 3 |
| CIRBP-AS1 | AK7 | 0.521216 | 3 | 0 | 3 |
| CIRBP-AS1 | STAU2-AS1 | 0.509804 | 4 | 0 | 3 |
| CIRBP-AS1 | GJB1 | 0.508455 | 4 | 0 | 3 |
For details and further investigation, click here
