| Full name: glutamate ionotropic receptor NMDA type subunit associated protein 1 | Alias Symbol: HNRGW|TMBIM3|LFG1 | ||
| Type: protein-coding gene | Cytoband: 8q24.3 | ||
| Entrez ID: 2907 | HGNC ID: HGNC:4589 | Ensembl Gene: ENSG00000178719 | OMIM ID: 138251 |
Expression of GRINA:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GRINA | 2907 | 212090_at | 1.0912 | 0.0938 | |
| GSE20347 | GRINA | 2907 | 212090_at | 0.4472 | 0.0008 | |
| GSE23400 | GRINA | 2907 | 212090_at | 0.4600 | 0.0000 | |
| GSE26886 | GRINA | 2907 | 212090_at | 0.3210 | 0.1675 | |
| GSE29001 | GRINA | 2907 | 212090_at | 0.3526 | 0.3338 | |
| GSE38129 | GRINA | 2907 | 212090_at | 0.3549 | 0.0001 | |
| GSE45670 | GRINA | 2907 | 212090_at | 0.2529 | 0.0329 | |
| GSE53622 | GRINA | 2907 | 44250 | 0.8966 | 0.0000 | |
| GSE53624 | GRINA | 2907 | 44250 | 0.8359 | 0.0000 | |
| GSE63941 | GRINA | 2907 | 212090_at | 0.2646 | 0.6399 | |
| GSE77861 | GRINA | 2907 | 212090_at | 0.3021 | 0.4109 | |
| GSE97050 | GRINA | 2907 | A_23_P316960 | 0.6864 | 0.0841 | |
| SRP007169 | GRINA | 2907 | RNAseq | 0.2061 | 0.5471 | |
| SRP008496 | GRINA | 2907 | RNAseq | 0.3991 | 0.1239 | |
| SRP064894 | GRINA | 2907 | RNAseq | 1.1662 | 0.0000 | |
| SRP133303 | GRINA | 2907 | RNAseq | 0.6084 | 0.0001 | |
| SRP159526 | GRINA | 2907 | RNAseq | 0.5180 | 0.0140 | |
| SRP193095 | GRINA | 2907 | RNAseq | 1.0274 | 0.0000 | |
| SRP219564 | GRINA | 2907 | RNAseq | 1.5410 | 0.0132 | |
| TCGA | GRINA | 2907 | RNAseq | 0.2730 | 0.0000 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by GRINA expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of GRINA:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GRINA | 2907 | 17 | 1 | 12 | |
| GSE20123 | GRINA | 2907 | 17 | 1 | 12 | |
| GSE43470 | GRINA | 2907 | 16 | 2 | 25 | |
| GSE46452 | GRINA | 2907 | 27 | 0 | 32 | |
| GSE47630 | GRINA | 2907 | 23 | 1 | 16 | |
| GSE54993 | GRINA | 2907 | 0 | 25 | 45 | |
| GSE54994 | GRINA | 2907 | 39 | 1 | 13 | |
| GSE60625 | GRINA | 2907 | 3 | 4 | 4 | |
| GSE74703 | GRINA | 2907 | 14 | 1 | 21 | |
| GSE74704 | GRINA | 2907 | 10 | 0 | 10 | |
| TCGA | GRINA | 2907 | 63 | 2 | 31 |
Total number of gains: 229; Total number of losses: 38; Total Number of normals: 221.
Somatic mutations of GRINA:
Generating mutation plots.
Highly correlated genes for GRINA:
Showing top 20/1314 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GRINA | ZBTB9 | 0.738582 | 3 | 0 | 3 |
| GRINA | GXYLT2 | 0.731288 | 3 | 0 | 3 |
| GRINA | SLC39A10 | 0.723595 | 3 | 0 | 3 |
| GRINA | TP53I11 | 0.717751 | 3 | 0 | 3 |
| GRINA | DHX36 | 0.717702 | 4 | 0 | 4 |
| GRINA | TNFRSF9 | 0.711826 | 4 | 0 | 4 |
| GRINA | DNAJB11 | 0.709599 | 5 | 0 | 5 |
| GRINA | C21orf58 | 0.709597 | 3 | 0 | 3 |
| GRINA | MARK4 | 0.708005 | 4 | 0 | 3 |
| GRINA | ZFP41 | 0.702526 | 5 | 0 | 5 |
| GRINA | PFN1 | 0.70221 | 6 | 0 | 4 |
| GRINA | HSP90B1 | 0.702207 | 5 | 0 | 5 |
| GRINA | DCAF13 | 0.700429 | 5 | 0 | 4 |
| GRINA | GP1BA | 0.699367 | 3 | 0 | 3 |
| GRINA | SAAL1 | 0.6872 | 4 | 0 | 4 |
| GRINA | SLC19A1 | 0.686802 | 3 | 0 | 3 |
| GRINA | SLC29A3 | 0.686142 | 3 | 0 | 3 |
| GRINA | RASAL3 | 0.685811 | 3 | 0 | 3 |
| GRINA | MTBP | 0.684097 | 5 | 0 | 5 |
| GRINA | PDE7A | 0.683457 | 5 | 0 | 4 |
For details and further investigation, click here
