CRYBB3

 

Full name: crystallin beta B3 Alias Symbol: 
Type: protein-coding gene Cytoband: 22q11.23
Entrez ID: 1417 HGNC ID: HGNC:2400 Ensembl Gene: ENSG00000100053 OMIM ID: 123630
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CRYBB3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CRYBB3 1417 207685_at 0.0231 0.9422
GSE20347 CRYBB3 1417 207685_at 0.0470 0.6073
GSE23400 CRYBB3 1417 207685_at -0.0080 0.8668
GSE26886 CRYBB3 1417 207685_at 0.1876 0.1301
GSE29001 CRYBB3 1417 207685_at 0.0754 0.7071
GSE38129 CRYBB3 1417 207685_at 0.0184 0.8489
GSE45670 CRYBB3 1417 207685_at 0.1410 0.1404
GSE53622 CRYBB3 1417 39558 -0.8388 0.0000
GSE53624 CRYBB3 1417 39558 -0.8072 0.0000
GSE63941 CRYBB3 1417 207685_at 0.2432 0.2086
GSE77861 CRYBB3 1417 207685_at -0.1125 0.3194
GSE97050 CRYBB3 1417 A_24_P359441 -0.3171 0.2938
SRP133303 CRYBB3 1417 RNAseq -0.7554 0.0263
SRP159526 CRYBB3 1417 RNAseq 1.4239 0.0012
SRP219564 CRYBB3 1417 RNAseq 0.8010 0.1858
TCGA CRYBB3 1417 RNAseq 1.9570 0.0006

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by CRYBB3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CRYBB3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CRYBB3 1417 4 6 20
GSE20123 CRYBB3 1417 4 5 21
GSE43470 CRYBB3 1417 3 5 35
GSE46452 CRYBB3 1417 31 1 27
GSE47630 CRYBB3 1417 8 5 27
GSE54993 CRYBB3 1417 3 6 61
GSE54994 CRYBB3 1417 11 7 35
GSE60625 CRYBB3 1417 5 0 6
GSE74703 CRYBB3 1417 3 4 29
GSE74704 CRYBB3 1417 1 3 16
TCGA CRYBB3 1417 26 14 56

Total number of gains: 99; Total number of losses: 56; Total Number of normals: 333.  


 

Somatic mutations of CRYBB3:

 

Generating mutation plots.

 

Highly correlated genes for CRYBB3:

 

Showing top 20/605 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CRYBB3BARHL20.844545303
CRYBB3BTBD90.81807303
CRYBB3RNF2220.807341303
CRYBB3NOTO0.802521303
CRYBB3IGLON50.787531303
CRYBB3MFSD2B0.779641303
CRYBB3CIB30.765922303
CRYBB3FAM163B0.764828303
CRYBB3CLEC18C0.76463303
CRYBB3COL20A10.76327404
CRYBB3LY6H0.752216303
CRYBB3ADAMTSL40.74739303
CRYBB3PATE30.742947303
CRYBB3KBTBD130.742384303
CRYBB3OR2Z10.74126303
CRYBB3DCD0.735672505
CRYBB3POM121L120.727063303
CRYBB3KIRREL20.726636303
CRYBB3CCDC1660.725061303
CRYBB3KRTAP20-10.724913303

For details and further investigation, click here