BARHL2

 

Full name: BarH like homeobox 2 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p22.2
Entrez ID: 343472 HGNC ID: HGNC:954 Ensembl Gene: ENSG00000143032 OMIM ID: 605212
Drug and gene relationship at DGIdb

 

Expression of BARHL2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 BARHL2 343472 28774 -0.8709 0.0000
GSE53624 BARHL2 343472 28774 -1.8826 0.0000
GSE97050 BARHL2 343472 A_23_P126349 -0.6603 0.1058
TCGA BARHL2 343472 RNAseq 1.5582 0.5113

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by BARHL2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of BARHL2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 BARHL2 343472 0 8 22
GSE20123 BARHL2 343472 0 8 22
GSE43470 BARHL2 343472 2 5 36
GSE46452 BARHL2 343472 1 1 57
GSE47630 BARHL2 343472 8 5 27
GSE54993 BARHL2 343472 0 1 69
GSE54994 BARHL2 343472 6 2 45
GSE60625 BARHL2 343472 0 0 11
GSE74703 BARHL2 343472 1 4 31
GSE74704 BARHL2 343472 0 5 15
TCGA BARHL2 343472 6 23 67

Total number of gains: 24; Total number of losses: 62; Total Number of normals: 402.  


 

Somatic mutations of BARHL2:

 

Generating mutation plots.

 

Highly correlated genes for BARHL2:

 

Showing top 20/221 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
BARHL2KCNA70.901446303
BARHL2BTBD90.894479303
BARHL2DCD0.874094303
BARHL2ITGB1BP20.861489303
BARHL2SCNN1D0.846396303
BARHL2CRYBB30.844545303
BARHL2KRTAP4-10.838144303
BARHL2OTOF0.835529303
BARHL2COL20A10.831449303
BARHL2OR2Z10.83091303
BARHL2KLK20.823432303
BARHL2ATP2B30.818052303
BARHL2HRC0.817261303
BARHL2RRP10.814302303
BARHL2KRTAP20-10.813906303
BARHL2MAFG0.813166303
BARHL2CLEC18C0.811875303
BARHL2NOTO0.809674303
BARHL2UPB10.809261303
BARHL2MGAT5B0.807099303

For details and further investigation, click here