FAM83E

 

Full name: family with sequence similarity 83 member E Alias Symbol: FLJ20200
Type: protein-coding gene Cytoband: 19q13.33
Entrez ID: 54854 HGNC ID: HGNC:25972 Ensembl Gene: ENSG00000105523 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of FAM83E:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM83E 54854 220312_at 0.1593 0.7339
GSE20347 FAM83E 54854 220312_at 0.0997 0.6176
GSE23400 FAM83E 54854 220312_at 0.0011 0.9896
GSE26886 FAM83E 54854 220312_at -0.0638 0.6037
GSE29001 FAM83E 54854 220312_at -0.0481 0.8496
GSE38129 FAM83E 54854 220312_at 0.0382 0.7987
GSE45670 FAM83E 54854 220312_at 0.2248 0.1507
GSE53622 FAM83E 54854 63244 0.2392 0.2005
GSE53624 FAM83E 54854 63244 0.0283 0.8239
GSE63941 FAM83E 54854 220312_at 0.4484 0.0416
GSE77861 FAM83E 54854 220312_at 0.0383 0.7208
GSE97050 FAM83E 54854 A_33_P3216467 0.2441 0.4628
SRP064894 FAM83E 54854 RNAseq -0.5312 0.3161
SRP133303 FAM83E 54854 RNAseq -0.1278 0.7161
SRP159526 FAM83E 54854 RNAseq -0.1957 0.7933
SRP193095 FAM83E 54854 RNAseq -0.5646 0.2055
SRP219564 FAM83E 54854 RNAseq 0.8977 0.3320
TCGA FAM83E 54854 RNAseq -0.8204 0.0159

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by FAM83E expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM83E:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM83E 54854 4 4 22
GSE20123 FAM83E 54854 4 3 23
GSE43470 FAM83E 54854 4 10 29
GSE46452 FAM83E 54854 45 1 13
GSE47630 FAM83E 54854 8 7 25
GSE54993 FAM83E 54854 17 4 49
GSE54994 FAM83E 54854 4 14 35
GSE60625 FAM83E 54854 9 0 2
GSE74703 FAM83E 54854 4 7 25
GSE74704 FAM83E 54854 4 1 15
TCGA FAM83E 54854 14 18 64

Total number of gains: 117; Total number of losses: 69; Total Number of normals: 302.  


 

Somatic mutations of FAM83E:

 

Generating mutation plots.

 

Highly correlated genes for FAM83E:

 

Showing top 20/104 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM83ESHARPIN0.7075303
FAM83EFOXJ10.697327403
FAM83EC7orf610.687543303
FAM83ESALL30.686658303
FAM83EYJEFN30.685289303
FAM83EANKRD240.681253303
FAM83EKLRG20.66664404
FAM83ERNF320.666048303
FAM83ERHPN10.662635303
FAM83ERTN4RL10.64438403
FAM83ESYNGAP10.642804303
FAM83EFBLN70.634614303
FAM83EMBD60.632924403
FAM83EMCF2L0.629467303
FAM83EFAM24B0.628557303
FAM83EZNF6200.628288303
FAM83ESTK32C0.626068303
FAM83EFOXB10.624977303
FAM83EZFAT0.624681403
FAM83ETRIM170.623623303

For details and further investigation, click here