| Full name: tripartite motif containing 17 | Alias Symbol: terf|RBCC | ||
| Type: protein-coding gene | Cytoband: 1q42.13 | ||
| Entrez ID: 51127 | HGNC ID: HGNC:13430 | Ensembl Gene: ENSG00000162931 | OMIM ID: 606123 |
| Drug and gene relationship at DGIdb | |||
Expression of TRIM17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRIM17 | 51127 | 220279_at | 0.1066 | 0.7927 | |
| GSE20347 | TRIM17 | 51127 | 220279_at | -0.0536 | 0.5693 | |
| GSE23400 | TRIM17 | 51127 | 220279_at | -0.0899 | 0.0171 | |
| GSE26886 | TRIM17 | 51127 | 220279_at | 0.5275 | 0.0016 | |
| GSE29001 | TRIM17 | 51127 | 220279_at | -0.1595 | 0.2935 | |
| GSE38129 | TRIM17 | 51127 | 220279_at | -0.0900 | 0.3438 | |
| GSE45670 | TRIM17 | 51127 | 220279_at | 0.0903 | 0.5750 | |
| GSE53622 | TRIM17 | 51127 | 158009 | 0.4755 | 0.0000 | |
| GSE53624 | TRIM17 | 51127 | 17443 | 0.0846 | 0.3276 | |
| GSE63941 | TRIM17 | 51127 | 220279_at | 0.1882 | 0.3709 | |
| GSE77861 | TRIM17 | 51127 | 220279_at | 0.0884 | 0.6537 | |
| GSE97050 | TRIM17 | 51127 | A_23_P422667 | 0.0485 | 0.8213 | |
| SRP133303 | TRIM17 | 51127 | RNAseq | 0.1478 | 0.6546 | |
| SRP159526 | TRIM17 | 51127 | RNAseq | 1.5710 | 0.0178 | |
| SRP193095 | TRIM17 | 51127 | RNAseq | 0.2725 | 0.2379 | |
| TCGA | TRIM17 | 51127 | RNAseq | 0.5693 | 0.0323 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TRIM17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRIM17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRIM17 | 51127 | 11 | 0 | 19 | |
| GSE20123 | TRIM17 | 51127 | 11 | 0 | 19 | |
| GSE43470 | TRIM17 | 51127 | 7 | 1 | 35 | |
| GSE46452 | TRIM17 | 51127 | 4 | 2 | 53 | |
| GSE47630 | TRIM17 | 51127 | 15 | 0 | 25 | |
| GSE54993 | TRIM17 | 51127 | 0 | 6 | 64 | |
| GSE54994 | TRIM17 | 51127 | 17 | 0 | 36 | |
| GSE60625 | TRIM17 | 51127 | 0 | 0 | 11 | |
| GSE74703 | TRIM17 | 51127 | 7 | 1 | 28 | |
| GSE74704 | TRIM17 | 51127 | 5 | 0 | 15 | |
| TCGA | TRIM17 | 51127 | 45 | 2 | 49 |
Total number of gains: 122; Total number of losses: 12; Total Number of normals: 354.
Somatic mutations of TRIM17:
Generating mutation plots.
Highly correlated genes for TRIM17:
Showing top 20/641 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRIM17 | DUSP9 | 0.860093 | 3 | 0 | 3 |
| TRIM17 | TIGD5 | 0.7924 | 3 | 0 | 3 |
| TRIM17 | PPP1R12C | 0.779926 | 3 | 0 | 3 |
| TRIM17 | PHF21A | 0.757368 | 3 | 0 | 3 |
| TRIM17 | LCT | 0.750376 | 3 | 0 | 3 |
| TRIM17 | WDR60 | 0.75025 | 3 | 0 | 3 |
| TRIM17 | SHISA4 | 0.733314 | 3 | 0 | 3 |
| TRIM17 | MOGAT3 | 0.733134 | 3 | 0 | 3 |
| TRIM17 | ALPL | 0.731274 | 4 | 0 | 3 |
| TRIM17 | CCDC28B | 0.730535 | 3 | 0 | 3 |
| TRIM17 | HOXB6 | 0.729885 | 3 | 0 | 3 |
| TRIM17 | IGSF9B | 0.726429 | 3 | 0 | 3 |
| TRIM17 | ARHGAP30 | 0.724634 | 3 | 0 | 3 |
| TRIM17 | DNAJB8 | 0.719804 | 3 | 0 | 3 |
| TRIM17 | C20orf141 | 0.719653 | 5 | 0 | 4 |
| TRIM17 | GSDMD | 0.718068 | 3 | 0 | 3 |
| TRIM17 | CDH4 | 0.712334 | 5 | 0 | 4 |
| TRIM17 | GTF2IRD2 | 0.710935 | 3 | 0 | 3 |
| TRIM17 | ZNF646 | 0.706644 | 7 | 0 | 7 |
| TRIM17 | LENG1 | 0.706406 | 3 | 0 | 3 |
For details and further investigation, click here
