| Full name: spalt like transcription factor 3 | Alias Symbol: ZNF796 | ||
| Type: protein-coding gene | Cytoband: 18q23 | ||
| Entrez ID: 27164 | HGNC ID: HGNC:10527 | Ensembl Gene: ENSG00000256463 | OMIM ID: 605079 |
| Drug and gene relationship at DGIdb | |||
Expression of SALL3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SALL3 | 27164 | 1553411_s_at | 0.3021 | 0.4911 | |
| GSE26886 | SALL3 | 27164 | 230785_at | 0.0576 | 0.5986 | |
| GSE45670 | SALL3 | 27164 | 243672_at | 0.1670 | 0.1638 | |
| GSE53622 | SALL3 | 27164 | 9018 | -0.1556 | 0.0947 | |
| GSE53624 | SALL3 | 27164 | 9018 | -0.1993 | 0.0788 | |
| GSE63941 | SALL3 | 27164 | 230785_at | 0.0946 | 0.8210 | |
| GSE77861 | SALL3 | 27164 | 230785_at | 0.0090 | 0.9647 | |
| GSE97050 | SALL3 | 27164 | A_33_P3296024 | 0.0895 | 0.7870 | |
| TCGA | SALL3 | 27164 | RNAseq | 5.4341 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by SALL3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SALL3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SALL3 | 27164 | 0 | 11 | 19 | |
| GSE20123 | SALL3 | 27164 | 1 | 11 | 18 | |
| GSE43470 | SALL3 | 27164 | 0 | 12 | 31 | |
| GSE46452 | SALL3 | 27164 | 1 | 26 | 32 | |
| GSE47630 | SALL3 | 27164 | 5 | 22 | 13 | |
| GSE54993 | SALL3 | 27164 | 9 | 0 | 61 | |
| GSE54994 | SALL3 | 27164 | 1 | 19 | 33 | |
| GSE60625 | SALL3 | 27164 | 0 | 4 | 7 | |
| GSE74703 | SALL3 | 27164 | 0 | 8 | 28 | |
| GSE74704 | SALL3 | 27164 | 0 | 9 | 11 | |
| TCGA | SALL3 | 27164 | 8 | 45 | 43 |
Total number of gains: 25; Total number of losses: 167; Total Number of normals: 296.
Somatic mutations of SALL3:
Generating mutation plots.
Highly correlated genes for SALL3:
Showing top 20/299 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SALL3 | TOR2A | 0.857164 | 3 | 0 | 3 |
| SALL3 | ATP2B2 | 0.83811 | 3 | 0 | 3 |
| SALL3 | YY2 | 0.836761 | 3 | 0 | 3 |
| SALL3 | GDF7 | 0.817152 | 3 | 0 | 3 |
| SALL3 | SLC22A12 | 0.803686 | 3 | 0 | 3 |
| SALL3 | IL12RB2 | 0.797304 | 3 | 0 | 3 |
| SALL3 | PAX2 | 0.794778 | 3 | 0 | 3 |
| SALL3 | PRSS38 | 0.793273 | 3 | 0 | 3 |
| SALL3 | ADM2 | 0.792844 | 3 | 0 | 3 |
| SALL3 | OR10AD1 | 0.780564 | 3 | 0 | 3 |
| SALL3 | GRIK4 | 0.779336 | 3 | 0 | 3 |
| SALL3 | CLTCL1 | 0.776872 | 3 | 0 | 3 |
| SALL3 | TSPAN11 | 0.775786 | 3 | 0 | 3 |
| SALL3 | BTNL2 | 0.774138 | 3 | 0 | 3 |
| SALL3 | DCDC1 | 0.773674 | 3 | 0 | 3 |
| SALL3 | TFE3 | 0.773402 | 3 | 0 | 3 |
| SALL3 | SLC19A3 | 0.771025 | 3 | 0 | 3 |
| SALL3 | HK3 | 0.77093 | 3 | 0 | 3 |
| SALL3 | KRTAP4-8 | 0.770517 | 3 | 0 | 3 |
| SALL3 | C1QL2 | 0.762902 | 3 | 0 | 3 |
For details and further investigation, click here
