| Full name: G-patch domain containing 2 | Alias Symbol: FLJ10252|CT110|PPP1R30|Pfa1 | ||
| Type: protein-coding gene | Cytoband: 1q41 | ||
| Entrez ID: 55105 | HGNC ID: HGNC:25499 | Ensembl Gene: ENSG00000092978 | OMIM ID: 616836 |
| Drug and gene relationship at DGIdb | |||
Expression of GPATCH2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GPATCH2 | 55105 | 219078_at | 0.4471 | 0.3111 | |
| GSE20347 | GPATCH2 | 55105 | 219078_at | 0.4727 | 0.0096 | |
| GSE23400 | GPATCH2 | 55105 | 219078_at | 0.5033 | 0.0000 | |
| GSE26886 | GPATCH2 | 55105 | 219078_at | 1.3187 | 0.0001 | |
| GSE29001 | GPATCH2 | 55105 | 219078_at | 0.7409 | 0.0118 | |
| GSE38129 | GPATCH2 | 55105 | 219078_at | 0.4903 | 0.0006 | |
| GSE45670 | GPATCH2 | 55105 | 219078_at | 0.6800 | 0.0262 | |
| GSE53622 | GPATCH2 | 55105 | 28374 | 0.4341 | 0.0000 | |
| GSE53624 | GPATCH2 | 55105 | 28374 | 0.6474 | 0.0000 | |
| GSE63941 | GPATCH2 | 55105 | 219078_at | -0.3557 | 0.3936 | |
| GSE77861 | GPATCH2 | 55105 | 219078_at | 1.2358 | 0.0039 | |
| GSE97050 | GPATCH2 | 55105 | A_33_P3355743 | -0.0691 | 0.7318 | |
| SRP007169 | GPATCH2 | 55105 | RNAseq | 0.4977 | 0.3476 | |
| SRP008496 | GPATCH2 | 55105 | RNAseq | 0.9271 | 0.0090 | |
| SRP064894 | GPATCH2 | 55105 | RNAseq | 0.2783 | 0.1908 | |
| SRP133303 | GPATCH2 | 55105 | RNAseq | 0.5518 | 0.0000 | |
| SRP159526 | GPATCH2 | 55105 | RNAseq | 0.5703 | 0.0596 | |
| SRP193095 | GPATCH2 | 55105 | RNAseq | 0.4444 | 0.0000 | |
| SRP219564 | GPATCH2 | 55105 | RNAseq | 0.4655 | 0.1669 | |
| TCGA | GPATCH2 | 55105 | RNAseq | 0.1695 | 0.0046 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by GPATCH2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of GPATCH2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GPATCH2 | 55105 | 9 | 0 | 21 | |
| GSE20123 | GPATCH2 | 55105 | 9 | 0 | 21 | |
| GSE43470 | GPATCH2 | 55105 | 6 | 1 | 36 | |
| GSE46452 | GPATCH2 | 55105 | 3 | 1 | 55 | |
| GSE47630 | GPATCH2 | 55105 | 15 | 0 | 25 | |
| GSE54993 | GPATCH2 | 55105 | 0 | 6 | 64 | |
| GSE54994 | GPATCH2 | 55105 | 14 | 0 | 39 | |
| GSE60625 | GPATCH2 | 55105 | 0 | 0 | 11 | |
| GSE74703 | GPATCH2 | 55105 | 6 | 1 | 29 | |
| GSE74704 | GPATCH2 | 55105 | 3 | 0 | 17 | |
| TCGA | GPATCH2 | 55105 | 44 | 3 | 49 |
Total number of gains: 109; Total number of losses: 12; Total Number of normals: 367.
Somatic mutations of GPATCH2:
Generating mutation plots.
Highly correlated genes for GPATCH2:
Showing top 20/1068 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GPATCH2 | CBFA2T2 | 0.854394 | 3 | 0 | 3 |
| GPATCH2 | TMEM65 | 0.832276 | 3 | 0 | 3 |
| GPATCH2 | EXOC6 | 0.827859 | 3 | 0 | 3 |
| GPATCH2 | BOD1 | 0.819866 | 3 | 0 | 3 |
| GPATCH2 | SDHAF2 | 0.795302 | 3 | 0 | 3 |
| GPATCH2 | POLR1B | 0.776572 | 4 | 0 | 3 |
| GPATCH2 | TAF1C | 0.776435 | 3 | 0 | 3 |
| GPATCH2 | LYAR | 0.776061 | 3 | 0 | 3 |
| GPATCH2 | RNF4 | 0.769717 | 3 | 0 | 3 |
| GPATCH2 | ZNF669 | 0.768844 | 3 | 0 | 3 |
| GPATCH2 | TTC8 | 0.759366 | 3 | 0 | 3 |
| GPATCH2 | TIGD1 | 0.750126 | 5 | 0 | 4 |
| GPATCH2 | LINC00328 | 0.750079 | 3 | 0 | 3 |
| GPATCH2 | EFCAB7 | 0.749222 | 3 | 0 | 3 |
| GPATCH2 | MRPS5 | 0.746794 | 3 | 0 | 3 |
| GPATCH2 | ZNF284 | 0.737822 | 3 | 0 | 3 |
| GPATCH2 | SLC37A3 | 0.735517 | 3 | 0 | 3 |
| GPATCH2 | THAP5 | 0.73541 | 3 | 0 | 3 |
| GPATCH2 | NUDCD1 | 0.734038 | 4 | 0 | 4 |
| GPATCH2 | ZSCAN21 | 0.730509 | 3 | 0 | 3 |
For details and further investigation, click here
