GTF2H3

 

Full name: general transcription factor IIH subunit 3 Alias Symbol: BTF2|TFIIH|P34
Type: protein-coding gene Cytoband: 12q24.31
Entrez ID: 2967 HGNC ID: HGNC:4657 Ensembl Gene: ENSG00000111358 OMIM ID: 601750
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of GTF2H3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GTF2H3 2967 222104_x_at 0.3055 0.6750
GSE20347 GTF2H3 2967 222104_x_at 0.3858 0.0457
GSE23400 GTF2H3 2967 222104_x_at 0.1583 0.0063
GSE26886 GTF2H3 2967 222104_x_at -0.0727 0.8028
GSE29001 GTF2H3 2967 222104_x_at 0.3325 0.1547
GSE38129 GTF2H3 2967 222104_x_at 0.3149 0.2275
GSE45670 GTF2H3 2967 222104_x_at 0.3338 0.0047
GSE53622 GTF2H3 2967 26632 0.6470 0.0000
GSE53624 GTF2H3 2967 26632 0.5067 0.0000
GSE63941 GTF2H3 2967 239346_at 0.0994 0.8339
GSE77861 GTF2H3 2967 222104_x_at 0.6013 0.1198
GSE97050 GTF2H3 2967 A_23_P386420 0.5958 0.1479
SRP007169 GTF2H3 2967 RNAseq 0.6531 0.1270
SRP008496 GTF2H3 2967 RNAseq 0.6976 0.0011
SRP064894 GTF2H3 2967 RNAseq 0.1277 0.6034
SRP133303 GTF2H3 2967 RNAseq 0.5200 0.0003
SRP159526 GTF2H3 2967 RNAseq 0.1585 0.5314
SRP193095 GTF2H3 2967 RNAseq 0.0518 0.6370
SRP219564 GTF2H3 2967 RNAseq -0.1943 0.5857
TCGA GTF2H3 2967 RNAseq 0.3098 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by GTF2H3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GTF2H3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GTF2H3 2967 5 5 20
GSE20123 GTF2H3 2967 5 5 20
GSE43470 GTF2H3 2967 2 1 40
GSE46452 GTF2H3 2967 9 1 49
GSE47630 GTF2H3 2967 9 3 28
GSE54993 GTF2H3 2967 0 5 65
GSE54994 GTF2H3 2967 4 8 41
GSE60625 GTF2H3 2967 0 0 11
GSE74703 GTF2H3 2967 2 0 34
GSE74704 GTF2H3 2967 3 3 14
TCGA GTF2H3 2967 21 11 64

Total number of gains: 60; Total number of losses: 42; Total Number of normals: 386.  


 

Somatic mutations of GTF2H3:

 

Generating mutation plots.

 

Highly correlated genes for GTF2H3:

 

Showing top 20/782 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GTF2H3ZNF1600.868617808
GTF2H3ZNF6110.866569808
GTF2H3SLC22A30.855453404
GTF2H3MZT2B0.850475909
GTF2H3ALMS10.841847808
GTF2H3ZNF7210.835669909
GTF2H3SLC35E10.8251661009
GTF2H3CMBL0.823185404
GTF2H3CHD10.818931303
GTF2H3C9orf640.81531605
GTF2H3CYCS0.814457303
GTF2H3HAUS20.80992111010
GTF2H3OPHN10.793749303
GTF2H3SSBP3-AS10.787327404
GTF2H3EXOC80.787303
GTF2H3UBXN2A0.785995606
GTF2H3TNRC6C-AS10.782941404
GTF2H3HPRT10.780659303
GTF2H3MRPL320.777748303
GTF2H3ZBED60.773375303

For details and further investigation, click here