| Full name: long intergenic non-protein coding RNA 482 | Alias Symbol: FLJ39421 | ||
| Type: non-coding RNA | Cytoband: 17q25.3 | ||
| Entrez ID: 284185 | HGNC ID: HGNC:26816 | Ensembl Gene: ENSG00000185168 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00482:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00482 | 284185 | 243263_at | 0.1158 | 0.6781 | |
| GSE26886 | LINC00482 | 284185 | 243263_at | 0.1937 | 0.2051 | |
| GSE45670 | LINC00482 | 284185 | 243263_at | 0.0052 | 0.9678 | |
| GSE63941 | LINC00482 | 284185 | 243263_at | 0.0203 | 0.9087 | |
| GSE77861 | LINC00482 | 284185 | 243263_at | -0.1688 | 0.3545 | |
| SRP133303 | LINC00482 | 284185 | RNAseq | -0.7132 | 0.0065 | |
| SRP159526 | LINC00482 | 284185 | RNAseq | -1.6598 | 0.0006 | |
| SRP219564 | LINC00482 | 284185 | RNAseq | -0.1229 | 0.8547 |
Upregulated datasets: 0; Downregulated datasets: 1.
Copy number change of LINC00482:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00482 | 284185 | 4 | 4 | 22 | |
| GSE20123 | LINC00482 | 284185 | 4 | 4 | 22 | |
| GSE43470 | LINC00482 | 284185 | 3 | 5 | 35 | |
| GSE46452 | LINC00482 | 284185 | 34 | 0 | 25 | |
| GSE47630 | LINC00482 | 284185 | 9 | 2 | 29 | |
| GSE54993 | LINC00482 | 284185 | 2 | 5 | 63 | |
| GSE54994 | LINC00482 | 284185 | 10 | 6 | 37 | |
| GSE60625 | LINC00482 | 284185 | 6 | 0 | 5 | |
| GSE74703 | LINC00482 | 284185 | 3 | 3 | 30 | |
| GSE74704 | LINC00482 | 284185 | 4 | 3 | 13 | |
| TCGA | LINC00482 | 284185 | 25 | 12 | 59 |
Total number of gains: 104; Total number of losses: 44; Total Number of normals: 340.
Somatic mutations of LINC00482:
Generating mutation plots.
Highly correlated genes for LINC00482:
Showing top 20/64 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00482 | ARMC5 | 0.756186 | 3 | 0 | 3 |
| LINC00482 | CYP2W1 | 0.74634 | 4 | 0 | 4 |
| LINC00482 | REXO1 | 0.704996 | 3 | 0 | 3 |
| LINC00482 | EFCAB13 | 0.699309 | 3 | 0 | 3 |
| LINC00482 | LTB4R2 | 0.695414 | 4 | 0 | 4 |
| LINC00482 | VRTN | 0.68913 | 3 | 0 | 3 |
| LINC00482 | PTP4A3 | 0.681617 | 3 | 0 | 3 |
| LINC00482 | JSRP1 | 0.681005 | 3 | 0 | 3 |
| LINC00482 | HNF1A | 0.679892 | 3 | 0 | 3 |
| LINC00482 | ISYNA1 | 0.678742 | 3 | 0 | 3 |
| LINC00482 | EGLN2 | 0.678135 | 3 | 0 | 3 |
| LINC00482 | C11orf97 | 0.673492 | 3 | 0 | 3 |
| LINC00482 | HOXD9 | 0.666274 | 3 | 0 | 3 |
| LINC00482 | GPR25 | 0.665414 | 3 | 0 | 3 |
| LINC00482 | ATAD3C | 0.658642 | 3 | 0 | 3 |
| LINC00482 | BIRC7 | 0.65648 | 4 | 0 | 4 |
| LINC00482 | FAM153A | 0.651536 | 3 | 0 | 3 |
| LINC00482 | EVX1 | 0.648326 | 4 | 0 | 4 |
| LINC00482 | KLK15 | 0.647967 | 3 | 0 | 3 |
| LINC00482 | CLIP1-AS1 | 0.647938 | 3 | 0 | 3 |
For details and further investigation, click here
