| Full name: myogenic differentiation 1 | Alias Symbol: PUM|MYOD|bHLHc1 | ||
| Type: protein-coding gene | Cytoband: 11p15.1 | ||
| Entrez ID: 4654 | HGNC ID: HGNC:7611 | Ensembl Gene: ENSG00000129152 | OMIM ID: 159970 |
| Drug and gene relationship at DGIdb | |||
Expression of MYOD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | MYOD1 | 4654 | 206657_s_at | 0.1715 | 0.4448 | |
| GSE20347 | MYOD1 | 4654 | 206657_s_at | -0.0512 | 0.5326 | |
| GSE23400 | MYOD1 | 4654 | 206657_s_at | 0.0273 | 0.4162 | |
| GSE26886 | MYOD1 | 4654 | 206657_s_at | -0.0697 | 0.6068 | |
| GSE29001 | MYOD1 | 4654 | 206657_s_at | -0.1178 | 0.4937 | |
| GSE38129 | MYOD1 | 4654 | 206657_s_at | -0.0548 | 0.5725 | |
| GSE45670 | MYOD1 | 4654 | 206657_s_at | 0.0678 | 0.3919 | |
| GSE53622 | MYOD1 | 4654 | 110610 | 0.1171 | 0.2506 | |
| GSE53624 | MYOD1 | 4654 | 110610 | 0.1064 | 0.4878 | |
| GSE63941 | MYOD1 | 4654 | 206657_s_at | 0.2191 | 0.1132 | |
| GSE77861 | MYOD1 | 4654 | 206657_s_at | 0.0022 | 0.9887 | |
| GSE97050 | MYOD1 | 4654 | A_33_P3334773 | -0.0617 | 0.8378 | |
| TCGA | MYOD1 | 4654 | RNAseq | 2.2710 | 0.2484 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by MYOD1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of MYOD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | MYOD1 | 4654 | 0 | 10 | 20 | |
| GSE20123 | MYOD1 | 4654 | 0 | 10 | 20 | |
| GSE43470 | MYOD1 | 4654 | 1 | 5 | 37 | |
| GSE46452 | MYOD1 | 4654 | 7 | 5 | 47 | |
| GSE47630 | MYOD1 | 4654 | 3 | 10 | 27 | |
| GSE54993 | MYOD1 | 4654 | 3 | 0 | 67 | |
| GSE54994 | MYOD1 | 4654 | 3 | 12 | 38 | |
| GSE60625 | MYOD1 | 4654 | 0 | 0 | 11 | |
| GSE74703 | MYOD1 | 4654 | 1 | 3 | 32 | |
| GSE74704 | MYOD1 | 4654 | 0 | 9 | 11 | |
| TCGA | MYOD1 | 4654 | 11 | 29 | 56 |
Total number of gains: 29; Total number of losses: 93; Total Number of normals: 366.
Somatic mutations of MYOD1:
Generating mutation plots.
Highly correlated genes for MYOD1:
Showing top 20/968 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| MYOD1 | OR2T27 | 0.897636 | 3 | 0 | 3 |
| MYOD1 | TMEM229A | 0.810959 | 3 | 0 | 3 |
| MYOD1 | SPACA3 | 0.808987 | 3 | 0 | 3 |
| MYOD1 | YY2 | 0.807865 | 3 | 0 | 3 |
| MYOD1 | TNFAIP8L1 | 0.804885 | 3 | 0 | 3 |
| MYOD1 | TOR2A | 0.794691 | 3 | 0 | 3 |
| MYOD1 | FBRSL1 | 0.793678 | 3 | 0 | 3 |
| MYOD1 | BBC3 | 0.792121 | 3 | 0 | 3 |
| MYOD1 | PLA2G2C | 0.786606 | 3 | 0 | 3 |
| MYOD1 | OR2T1 | 0.783752 | 3 | 0 | 3 |
| MYOD1 | MUC3A | 0.777535 | 3 | 0 | 3 |
| MYOD1 | OTOG | 0.776137 | 3 | 0 | 3 |
| MYOD1 | RNF180 | 0.775529 | 3 | 0 | 3 |
| MYOD1 | PABPN1L | 0.775076 | 3 | 0 | 3 |
| MYOD1 | TTC21A | 0.775023 | 3 | 0 | 3 |
| MYOD1 | PAX6 | 0.760897 | 4 | 0 | 4 |
| MYOD1 | OR5A1 | 0.759639 | 4 | 0 | 4 |
| MYOD1 | KRTAP10-12 | 0.75911 | 3 | 0 | 3 |
| MYOD1 | MRGPRE | 0.757352 | 3 | 0 | 3 |
| MYOD1 | C1QL2 | 0.757248 | 3 | 0 | 3 |
For details and further investigation, click here
