NLRP4

 

Full name: NLR family pyrin domain containing 4 Alias Symbol: PYPAF4|FLJ32126|PAN2|RNH2|CLR19.5|CT58
Type: protein-coding gene Cytoband: 19q13.43
Entrez ID: 147945 HGNC ID: HGNC:22943 Ensembl Gene: ENSG00000160505 OMIM ID: 609645
Drug and gene relationship at DGIdb

 

Expression of NLRP4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NLRP4 147945 242334_at 0.0018 0.9966
GSE26886 NLRP4 147945 242334_at 0.0182 0.8895
GSE45670 NLRP4 147945 242334_at 0.1014 0.2267
GSE53622 NLRP4 147945 84671 -0.1564 0.4302
GSE53624 NLRP4 147945 16296 -0.2357 0.0223
GSE63941 NLRP4 147945 242334_at 0.1530 0.2269
GSE77861 NLRP4 147945 242334_at -0.1010 0.3076
GSE97050 NLRP4 147945 A_33_P3406047 -0.0137 0.9635
TCGA NLRP4 147945 RNAseq 1.2366 0.3045

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NLRP4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NLRP4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NLRP4 147945 3 4 23
GSE20123 NLRP4 147945 3 3 24
GSE43470 NLRP4 147945 3 9 31
GSE46452 NLRP4 147945 45 1 13
GSE47630 NLRP4 147945 8 6 26
GSE54993 NLRP4 147945 17 4 49
GSE54994 NLRP4 147945 5 13 35
GSE60625 NLRP4 147945 9 0 2
GSE74703 NLRP4 147945 3 6 27
GSE74704 NLRP4 147945 3 1 16
TCGA NLRP4 147945 19 16 61

Total number of gains: 118; Total number of losses: 63; Total Number of normals: 307.  


 

Somatic mutations of NLRP4:

 

Generating mutation plots.

 

Highly correlated genes for NLRP4:

 

Showing top 20/33 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NLRP4TEKT10.714822303
NLRP4DNAJC5G0.702894303
NLRP4KRTAP11-10.684033303
NLRP4TMPRSS60.662805303
NLRP4TAS2R90.66148303
NLRP4FNDC90.650264303
NLRP4SLC35F30.645047303
NLRP4TBXAS10.635879303
NLRP4CAPSL0.634594303
NLRP4TMEM2350.630401303
NLRP4SPP20.624981303
NLRP4WFDC120.61544303
NLRP4MFSD6L0.610358403
NLRP4KLK140.609389303
NLRP4SIT10.592296303
NLRP4ABCG40.589185403
NLRP4TTLL20.586525303
NLRP4LGALS130.585266303
NLRP4BPIFC0.582065403
NLRP4LINC002210.578524303

For details and further investigation, click here