PRKAG3

 

Full name: protein kinase AMP-activated non-catalytic subunit gamma 3 Alias Symbol: 
Type: protein-coding gene Cytoband: 2q35
Entrez ID: 53632 HGNC ID: HGNC:9387 Ensembl Gene: ENSG00000115592 OMIM ID: 604976
Drug and gene relationship at DGIdb

 

PRKAG3 involved pathways:

KEGG pathway Description View
hsa04068FoxO signaling pathway
hsa04152AMPK signaling pathway
hsa04211Longevity regulating pathway - mammal
hsa04213Longevity regulating pathway - multiple species
hsa04710Circadian rhythm
hsa04910Insulin signaling pathway
hsa04920Adipocytokine signaling pathway
hsa04921Oxytocin signaling pathway
hsa04922Glucagon signaling pathway
hsa04931Insulin resistance
hsa04932Non-alcoholic fatty liver disease (NAFLD)

 

Expression of PRKAG3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PRKAG3 53632 223904_at -0.1125 0.5444
GSE26886 PRKAG3 53632 223904_at 0.0798 0.5081
GSE45670 PRKAG3 53632 223904_at 0.0498 0.5747
GSE53622 PRKAG3 53632 105471 0.5050 0.0000
GSE53624 PRKAG3 53632 105471 0.4378 0.0000
GSE63941 PRKAG3 53632 223904_at 0.0660 0.7105
GSE77861 PRKAG3 53632 223904_at -0.0143 0.9219
GSE97050 PRKAG3 53632 A_33_P3244843 -0.0801 0.8207
TCGA PRKAG3 53632 RNAseq 1.3592 0.1824

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by PRKAG3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PRKAG3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PRKAG3 53632 1 14 15
GSE20123 PRKAG3 53632 1 13 16
GSE43470 PRKAG3 53632 1 7 35
GSE46452 PRKAG3 53632 0 5 54
GSE47630 PRKAG3 53632 4 5 31
GSE54993 PRKAG3 53632 1 2 67
GSE54994 PRKAG3 53632 7 10 36
GSE60625 PRKAG3 53632 0 3 8
GSE74703 PRKAG3 53632 1 5 30
GSE74704 PRKAG3 53632 1 7 12
TCGA PRKAG3 53632 11 27 58

Total number of gains: 28; Total number of losses: 98; Total Number of normals: 362.  


 

Somatic mutations of PRKAG3:

 

Generating mutation plots.

 

Highly correlated genes for PRKAG3:

 

Showing top 20/151 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PRKAG3MRGPRG0.776075303
PRKAG3TMEM2350.75171303
PRKAG3SLC6A30.731834303
PRKAG3PRLH0.729098303
PRKAG3GCLM0.724461303
PRKAG3C2CD4D0.718677303
PRKAG3BLACE0.715892303
PRKAG3CHD50.711827404
PRKAG3DCDC10.709551303
PRKAG3C9orf1530.707725303
PRKAG3GRIK40.705818303
PRKAG3MS4A180.704844303
PRKAG3POM121L120.697672303
PRKAG3USH1C0.697663303
PRKAG3CIB30.697146404
PRKAG3DNAI10.696966303
PRKAG3SCN9A0.696806303
PRKAG3C19orf710.695462303
PRKAG3RIMS40.692029303
PRKAG3ONECUT10.689343303

For details and further investigation, click here