C9orf153

 

Full name: chromosome 9 open reading frame 153 Alias Symbol: bA507D14.1
Type: protein-coding gene Cytoband: 9q21.33
Entrez ID: 389766 HGNC ID: HGNC:31456 Ensembl Gene: ENSG00000187753 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C9orf153:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 C9orf153 389766 84044 0.3001 0.0049
GSE53624 C9orf153 389766 84044 0.2934 0.0071
GSE97050 C9orf153 389766 A_33_P3274528 0.0992 0.6203
TCGA C9orf153 389766 RNAseq 0.3458 0.6126

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C9orf153 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C9orf153:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C9orf153 389766 5 10 15
GSE20123 C9orf153 389766 5 10 15
GSE43470 C9orf153 389766 6 3 34
GSE46452 C9orf153 389766 6 14 39
GSE47630 C9orf153 389766 1 18 21
GSE54993 C9orf153 389766 4 2 64
GSE54994 C9orf153 389766 6 11 36
GSE60625 C9orf153 389766 0 0 11
GSE74703 C9orf153 389766 5 3 28
GSE74704 C9orf153 389766 3 7 10
TCGA C9orf153 389766 20 27 49

Total number of gains: 61; Total number of losses: 105; Total Number of normals: 322.  


 

Somatic mutations of C9orf153:

 

Generating mutation plots.

 

Highly correlated genes for C9orf153:

 

Showing top 20/322 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C9orf153ZNF5270.903905303
C9orf153SPRED30.897733303
C9orf153TNFAIP8L10.885239303
C9orf153GJD40.872354303
C9orf153F2RL30.868065303
C9orf153CNOT30.864614303
C9orf153RBM430.856239303
C9orf153NPPB0.852749303
C9orf153KLF170.85082303
C9orf153WDR870.850638303
C9orf153STRC0.848974303
C9orf153NKX6-30.8443303
C9orf153KCNH30.842657303
C9orf153YY20.842079303
C9orf153TMEM2350.84027303
C9orf153BMP8B0.838196303
C9orf153FBRSL10.83782303
C9orf153MRPS160.835916303
C9orf153GRIK40.83563303
C9orf153SLC6A30.834976303

For details and further investigation, click here