| Full name: retinol dehydrogenase 13 | Alias Symbol: SDR7C3 | ||
| Type: protein-coding gene | Cytoband: 19q13.42 | ||
| Entrez ID: 112724 | HGNC ID: HGNC:19978 | Ensembl Gene: ENSG00000160439 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RDH13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RDH13 | 112724 | 225467_s_at | 0.0418 | 0.9645 | |
| GSE26886 | RDH13 | 112724 | 225467_s_at | -1.1037 | 0.0000 | |
| GSE45670 | RDH13 | 112724 | 225467_s_at | -0.1989 | 0.3784 | |
| GSE53622 | RDH13 | 112724 | 44497 | -1.0483 | 0.0000 | |
| GSE53624 | RDH13 | 112724 | 44497 | -0.8832 | 0.0000 | |
| GSE63941 | RDH13 | 112724 | 1559190_s_at | 1.3719 | 0.0167 | |
| GSE77861 | RDH13 | 112724 | 225467_s_at | -0.1368 | 0.6632 | |
| GSE97050 | RDH13 | 112724 | A_23_P39185 | -0.0798 | 0.7377 | |
| SRP007169 | RDH13 | 112724 | RNAseq | -2.1533 | 0.0001 | |
| SRP064894 | RDH13 | 112724 | RNAseq | -1.6571 | 0.0000 | |
| SRP133303 | RDH13 | 112724 | RNAseq | -0.6257 | 0.0161 | |
| SRP159526 | RDH13 | 112724 | RNAseq | -1.2967 | 0.0001 | |
| SRP193095 | RDH13 | 112724 | RNAseq | -1.1727 | 0.0000 | |
| SRP219564 | RDH13 | 112724 | RNAseq | -1.6438 | 0.0026 | |
| TCGA | RDH13 | 112724 | RNAseq | -0.2284 | 0.0199 |
Upregulated datasets: 1; Downregulated datasets: 7.
Survival by RDH13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RDH13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RDH13 | 112724 | 3 | 4 | 23 | |
| GSE20123 | RDH13 | 112724 | 3 | 3 | 24 | |
| GSE43470 | RDH13 | 112724 | 3 | 11 | 29 | |
| GSE46452 | RDH13 | 112724 | 45 | 1 | 13 | |
| GSE47630 | RDH13 | 112724 | 8 | 6 | 26 | |
| GSE54993 | RDH13 | 112724 | 17 | 4 | 49 | |
| GSE54994 | RDH13 | 112724 | 4 | 13 | 36 | |
| GSE60625 | RDH13 | 112724 | 9 | 0 | 2 | |
| GSE74703 | RDH13 | 112724 | 3 | 7 | 26 | |
| GSE74704 | RDH13 | 112724 | 3 | 1 | 16 | |
| TCGA | RDH13 | 112724 | 19 | 14 | 63 |
Total number of gains: 117; Total number of losses: 64; Total Number of normals: 307.
Somatic mutations of RDH13:
Generating mutation plots.
Highly correlated genes for RDH13:
Showing top 20/470 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RDH13 | ABHD11 | 0.787384 | 3 | 0 | 3 |
| RDH13 | TMEM184A | 0.739882 | 4 | 0 | 3 |
| RDH13 | HMGB4 | 0.734001 | 3 | 0 | 3 |
| RDH13 | MAST4 | 0.73277 | 5 | 0 | 5 |
| RDH13 | MFSD2B | 0.726406 | 3 | 0 | 3 |
| RDH13 | FAM163B | 0.726367 | 3 | 0 | 3 |
| RDH13 | RPIA | 0.722824 | 3 | 0 | 3 |
| RDH13 | CYSRT1 | 0.722467 | 4 | 0 | 4 |
| RDH13 | OR10G8 | 0.719703 | 3 | 0 | 3 |
| RDH13 | KRT32 | 0.717082 | 4 | 0 | 4 |
| RDH13 | GCHFR | 0.716713 | 3 | 0 | 3 |
| RDH13 | KLKB1 | 0.71396 | 3 | 0 | 3 |
| RDH13 | BTNL9 | 0.711286 | 3 | 0 | 3 |
| RDH13 | CPTP | 0.711193 | 3 | 0 | 3 |
| RDH13 | CARD14 | 0.710749 | 6 | 0 | 6 |
| RDH13 | MIR210HG | 0.707938 | 4 | 0 | 4 |
| RDH13 | TYRO3 | 0.706647 | 5 | 0 | 5 |
| RDH13 | NOTO | 0.706287 | 3 | 0 | 3 |
| RDH13 | SLC35C1 | 0.70367 | 5 | 0 | 5 |
| RDH13 | CLEC18C | 0.700316 | 3 | 0 | 3 |
For details and further investigation, click here
