| Full name: RNF139 antisense RNA 1 (head to head) | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 8q24.13 | ||
| Entrez ID: 101927612 | HGNC ID: HGNC:48940 | Ensembl Gene: ENSG00000245149 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RNF139-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF139-AS1 | 101927612 | 227745_at | 0.4782 | 0.3247 | |
| GSE26886 | RNF139-AS1 | 101927612 | 227745_at | 0.6080 | 0.0208 | |
| GSE45670 | RNF139-AS1 | 101927612 | 227745_at | -0.0823 | 0.7166 | |
| GSE53622 | RNF139-AS1 | 101927612 | 76192 | 0.3579 | 0.0079 | |
| GSE53624 | RNF139-AS1 | 101927612 | 47524 | 0.6588 | 0.0000 | |
| GSE63941 | RNF139-AS1 | 101927612 | 227745_at | 1.1012 | 0.0498 | |
| GSE77861 | RNF139-AS1 | 101927612 | 227745_at | 0.1589 | 0.2197 | |
| SRP007169 | RNF139-AS1 | 101927612 | RNAseq | 0.5838 | 0.6277 | |
| SRP064894 | RNF139-AS1 | 101927612 | RNAseq | 0.8481 | 0.0117 | |
| SRP133303 | RNF139-AS1 | 101927612 | RNAseq | 0.5795 | 0.0400 | |
| SRP159526 | RNF139-AS1 | 101927612 | RNAseq | 1.0634 | 0.1614 | |
| SRP193095 | RNF139-AS1 | 101927612 | RNAseq | -0.0506 | 0.7679 | |
| SRP219564 | RNF139-AS1 | 101927612 | RNAseq | 0.8001 | 0.1189 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by RNF139-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RNF139-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF139-AS1 | 101927612 | 19 | 0 | 11 | |
| GSE20123 | RNF139-AS1 | 101927612 | 20 | 0 | 10 | |
| GSE43470 | RNF139-AS1 | 101927612 | 22 | 0 | 21 | |
| GSE46452 | RNF139-AS1 | 101927612 | 28 | 0 | 31 | |
| GSE47630 | RNF139-AS1 | 101927612 | 24 | 0 | 16 | |
| GSE54993 | RNF139-AS1 | 101927612 | 0 | 21 | 49 | |
| GSE54994 | RNF139-AS1 | 101927612 | 36 | 1 | 16 | |
| GSE60625 | RNF139-AS1 | 101927612 | 0 | 4 | 7 | |
| GSE74703 | RNF139-AS1 | 101927612 | 19 | 0 | 17 | |
| GSE74704 | RNF139-AS1 | 101927612 | 13 | 0 | 7 |
Total number of gains: 181; Total number of losses: 26; Total Number of normals: 185.
Somatic mutations of RNF139-AS1:
Generating mutation plots.
Highly correlated genes for RNF139-AS1:
Showing top 20/133 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF139-AS1 | DGKD | 0.741721 | 3 | 0 | 3 |
| RNF139-AS1 | C14orf93 | 0.718538 | 3 | 0 | 3 |
| RNF139-AS1 | IL12RB2 | 0.711115 | 3 | 0 | 3 |
| RNF139-AS1 | MUCL1 | 0.702164 | 3 | 0 | 3 |
| RNF139-AS1 | IFT43 | 0.689928 | 3 | 0 | 3 |
| RNF139-AS1 | MMP9 | 0.68879 | 3 | 0 | 3 |
| RNF139-AS1 | NSMCE2 | 0.685587 | 5 | 0 | 4 |
| RNF139-AS1 | NECAB3 | 0.677246 | 3 | 0 | 3 |
| RNF139-AS1 | CCS | 0.676526 | 3 | 0 | 3 |
| RNF139-AS1 | ZMYND15 | 0.672591 | 3 | 0 | 3 |
| RNF139-AS1 | RPL8 | 0.668308 | 4 | 0 | 4 |
| RNF139-AS1 | B3GNT9 | 0.664357 | 3 | 0 | 3 |
| RNF139-AS1 | REM2 | 0.661863 | 3 | 0 | 3 |
| RNF139-AS1 | GPR137C | 0.657483 | 3 | 0 | 3 |
| RNF139-AS1 | ERVMER34-1 | 0.654843 | 3 | 0 | 3 |
| RNF139-AS1 | RNF19A | 0.650204 | 3 | 0 | 3 |
| RNF139-AS1 | APBA3 | 0.647245 | 3 | 0 | 3 |
| RNF139-AS1 | JAG2 | 0.640403 | 4 | 0 | 3 |
| RNF139-AS1 | RNF139 | 0.637336 | 4 | 0 | 4 |
| RNF139-AS1 | WDYHV1 | 0.636684 | 4 | 0 | 4 |
For details and further investigation, click here
