| Full name: RNF144A antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 2p25.1 | ||
| Entrez ID: 386597 | HGNC ID: HGNC:30963 | Ensembl Gene: ENSG00000228203 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RNF144A-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF144A-AS1 | 386597 | 1556797_at | 0.0116 | 0.9807 | |
| GSE26886 | RNF144A-AS1 | 386597 | 1556797_at | -0.0286 | 0.9158 | |
| GSE45670 | RNF144A-AS1 | 386597 | 1556797_at | 0.0174 | 0.9224 | |
| GSE53622 | RNF144A-AS1 | 386597 | 73190 | -0.1707 | 0.1854 | |
| GSE53624 | RNF144A-AS1 | 386597 | 73190 | -0.8949 | 0.0000 | |
| GSE63941 | RNF144A-AS1 | 386597 | 1556797_at | 0.6640 | 0.0088 | |
| GSE77861 | RNF144A-AS1 | 386597 | 1556797_at | -0.0326 | 0.8509 | |
| SRP007169 | RNF144A-AS1 | 386597 | RNAseq | 2.0936 | 0.0134 | |
| SRP064894 | RNF144A-AS1 | 386597 | RNAseq | 2.1841 | 0.0000 | |
| SRP133303 | RNF144A-AS1 | 386597 | RNAseq | 1.2284 | 0.0002 | |
| SRP159526 | RNF144A-AS1 | 386597 | RNAseq | 1.9180 | 0.0049 | |
| SRP219564 | RNF144A-AS1 | 386597 | RNAseq | 1.3846 | 0.0190 |
Upregulated datasets: 5; Downregulated datasets: 0.
Survival by RNF144A-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RNF144A-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF144A-AS1 | 386597 | 8 | 2 | 20 | |
| GSE20123 | RNF144A-AS1 | 386597 | 8 | 2 | 20 | |
| GSE43470 | RNF144A-AS1 | 386597 | 2 | 0 | 41 | |
| GSE46452 | RNF144A-AS1 | 386597 | 3 | 4 | 52 | |
| GSE47630 | RNF144A-AS1 | 386597 | 7 | 0 | 33 | |
| GSE54993 | RNF144A-AS1 | 386597 | 0 | 7 | 63 | |
| GSE54994 | RNF144A-AS1 | 386597 | 11 | 0 | 42 | |
| GSE60625 | RNF144A-AS1 | 386597 | 0 | 3 | 8 | |
| GSE74703 | RNF144A-AS1 | 386597 | 2 | 0 | 34 | |
| GSE74704 | RNF144A-AS1 | 386597 | 8 | 1 | 11 |
Total number of gains: 49; Total number of losses: 19; Total Number of normals: 324.
Somatic mutations of RNF144A-AS1:
Generating mutation plots.
Highly correlated genes for RNF144A-AS1:
Showing top 20/106 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF144A-AS1 | PPP1R27 | 0.727442 | 3 | 0 | 3 |
| RNF144A-AS1 | BTK | 0.70952 | 3 | 0 | 3 |
| RNF144A-AS1 | DMWD | 0.688144 | 3 | 0 | 3 |
| RNF144A-AS1 | POM121L12 | 0.670302 | 3 | 0 | 3 |
| RNF144A-AS1 | PXMP2 | 0.650555 | 3 | 0 | 3 |
| RNF144A-AS1 | UNC79 | 0.647211 | 3 | 0 | 3 |
| RNF144A-AS1 | OTC | 0.625578 | 3 | 0 | 3 |
| RNF144A-AS1 | OR1D2 | 0.624795 | 3 | 0 | 3 |
| RNF144A-AS1 | LINC01312 | 0.622872 | 4 | 0 | 3 |
| RNF144A-AS1 | RDH12 | 0.617018 | 3 | 0 | 3 |
| RNF144A-AS1 | CEACAM4 | 0.615047 | 4 | 0 | 4 |
| RNF144A-AS1 | DIRC1 | 0.613966 | 3 | 0 | 3 |
| RNF144A-AS1 | BPIFB6 | 0.613804 | 3 | 0 | 3 |
| RNF144A-AS1 | MYOG | 0.611478 | 3 | 0 | 3 |
| RNF144A-AS1 | SPRR1A | 0.608829 | 3 | 0 | 3 |
| RNF144A-AS1 | KLK12 | 0.60847 | 3 | 0 | 3 |
| RNF144A-AS1 | PGLYRP3 | 0.608451 | 3 | 0 | 3 |
| RNF144A-AS1 | ATP1B2 | 0.607283 | 3 | 0 | 3 |
| RNF144A-AS1 | KIAA0754 | 0.607041 | 3 | 0 | 3 |
| RNF144A-AS1 | TMEM79 | 0.605551 | 3 | 0 | 3 |
For details and further investigation, click here
