SLC1A7

 

Full name: solute carrier family 1 member 7 Alias Symbol: EAAT5
Type: protein-coding gene Cytoband: 1p32.3
Entrez ID: 6512 HGNC ID: HGNC:10945 Ensembl Gene: ENSG00000162383 OMIM ID: 604471
Drug and gene relationship at DGIdb

 

Expression of SLC1A7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC1A7 6512 207355_at 0.0665 0.8436
GSE20347 SLC1A7 6512 207355_at -0.1667 0.0609
GSE23400 SLC1A7 6512 207355_at -0.1714 0.0000
GSE26886 SLC1A7 6512 207355_at -0.0624 0.6571
GSE29001 SLC1A7 6512 207355_at -0.2027 0.0800
GSE38129 SLC1A7 6512 207355_at -0.3522 0.0036
GSE45670 SLC1A7 6512 207355_at 0.1319 0.1226
GSE53622 SLC1A7 6512 45120 -0.0589 0.3503
GSE53624 SLC1A7 6512 45120 -0.0120 0.8702
GSE63941 SLC1A7 6512 207355_at 0.3690 0.0753
GSE77861 SLC1A7 6512 207355_at -0.1398 0.2596
GSE97050 SLC1A7 6512 A_23_P325562 -0.1914 0.6488
SRP133303 SLC1A7 6512 RNAseq -1.1786 0.0002
SRP159526 SLC1A7 6512 RNAseq -1.5436 0.0168
SRP219564 SLC1A7 6512 RNAseq -1.0499 0.3411
TCGA SLC1A7 6512 RNAseq -2.0072 0.0000

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by SLC1A7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC1A7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC1A7 6512 3 4 23
GSE20123 SLC1A7 6512 3 3 24
GSE43470 SLC1A7 6512 6 2 35
GSE46452 SLC1A7 6512 2 1 56
GSE47630 SLC1A7 6512 8 4 28
GSE54993 SLC1A7 6512 0 1 69
GSE54994 SLC1A7 6512 11 2 40
GSE60625 SLC1A7 6512 0 0 11
GSE74703 SLC1A7 6512 4 1 31
GSE74704 SLC1A7 6512 2 0 18
TCGA SLC1A7 6512 10 18 68

Total number of gains: 49; Total number of losses: 36; Total Number of normals: 403.  


 

Somatic mutations of SLC1A7:

 

Generating mutation plots.

 

Highly correlated genes for SLC1A7:

 

Showing top 20/939 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC1A7TCTE30.729347303
SLC1A7FAM151A0.706213303
SLC1A7FAM71A0.696015303
SLC1A7THPO0.689537605
SLC1A7MASP20.687379605
SLC1A7ANHX0.687258303
SLC1A7ENGASE0.685849303
SLC1A7GRIN10.684773505
SLC1A7CYP3A430.675049505
SLC1A7DUX10.673901505
SLC1A7GJD40.673897404
SLC1A7PRRG30.673149303
SLC1A7TMEM950.670176303
SLC1A7RASL10B0.670029303
SLC1A7FMNL10.66969303
SLC1A7SLC10A10.668921605
SLC1A7MMP250.666339605
SLC1A7SKAP10.66465303
SLC1A7TULP20.664598605
SLC1A7GNRH20.664297705

For details and further investigation, click here