| Full name: sorting nexin 22 | Alias Symbol: FLJ13952 | ||
| Type: protein-coding gene | Cytoband: 15q22.31 | ||
| Entrez ID: 79856 | HGNC ID: HGNC:16315 | Ensembl Gene: ENSG00000157734 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SNX22:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNX22 | 79856 | 230509_at | 0.0334 | 0.9082 | |
| GSE26886 | SNX22 | 79856 | 230509_at | -0.0420 | 0.7956 | |
| GSE45670 | SNX22 | 79856 | 230509_at | 0.0409 | 0.6309 | |
| GSE53622 | SNX22 | 79856 | 107716 | -0.3448 | 0.0004 | |
| GSE53624 | SNX22 | 79856 | 107716 | -0.2495 | 0.0013 | |
| GSE63941 | SNX22 | 79856 | 230509_at | -0.0607 | 0.6180 | |
| GSE77861 | SNX22 | 79856 | 235460_at | -0.1333 | 0.2824 | |
| GSE97050 | SNX22 | 79856 | A_33_P3212172 | 0.2906 | 0.2660 | |
| SRP007169 | SNX22 | 79856 | RNAseq | 0.0539 | 0.9278 | |
| SRP064894 | SNX22 | 79856 | RNAseq | 0.4191 | 0.0453 | |
| SRP133303 | SNX22 | 79856 | RNAseq | -0.1015 | 0.5335 | |
| SRP159526 | SNX22 | 79856 | RNAseq | 0.2462 | 0.7069 | |
| SRP193095 | SNX22 | 79856 | RNAseq | 0.1594 | 0.3228 | |
| SRP219564 | SNX22 | 79856 | RNAseq | 0.2146 | 0.6879 | |
| TCGA | SNX22 | 79856 | RNAseq | -0.0855 | 0.3827 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNX22 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNX22:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNX22 | 79856 | 7 | 3 | 20 | |
| GSE20123 | SNX22 | 79856 | 7 | 3 | 20 | |
| GSE43470 | SNX22 | 79856 | 4 | 6 | 33 | |
| GSE46452 | SNX22 | 79856 | 3 | 7 | 49 | |
| GSE47630 | SNX22 | 79856 | 8 | 10 | 22 | |
| GSE54993 | SNX22 | 79856 | 5 | 6 | 59 | |
| GSE54994 | SNX22 | 79856 | 6 | 8 | 39 | |
| GSE60625 | SNX22 | 79856 | 4 | 0 | 7 | |
| GSE74703 | SNX22 | 79856 | 4 | 3 | 29 | |
| GSE74704 | SNX22 | 79856 | 3 | 3 | 14 | |
| TCGA | SNX22 | 79856 | 10 | 17 | 69 |
Total number of gains: 61; Total number of losses: 66; Total Number of normals: 361.
Somatic mutations of SNX22:
Generating mutation plots.
Highly correlated genes for SNX22:
Showing top 20/21 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNX22 | ERVV-1 | 0.625746 | 3 | 0 | 3 |
| SNX22 | KAAG1 | 0.619661 | 3 | 0 | 3 |
| SNX22 | LCN15 | 0.61128 | 4 | 0 | 3 |
| SNX22 | IGLL1 | 0.573372 | 4 | 0 | 3 |
| SNX22 | LINC01169 | 0.56973 | 4 | 0 | 3 |
| SNX22 | MYH7B | 0.568482 | 4 | 0 | 3 |
| SNX22 | NAT16 | 0.5646 | 4 | 0 | 3 |
| SNX22 | BIRC7 | 0.561105 | 4 | 0 | 3 |
| SNX22 | NKAIN4 | 0.549341 | 3 | 0 | 3 |
| SNX22 | TNFRSF13B | 0.546135 | 5 | 0 | 3 |
| SNX22 | SLC38A3 | 0.541937 | 4 | 0 | 3 |
| SNX22 | GRIN1 | 0.54168 | 4 | 0 | 3 |
| SNX22 | PARP15 | 0.54006 | 3 | 0 | 3 |
| SNX22 | OR10H1 | 0.538234 | 4 | 0 | 3 |
| SNX22 | SNX8 | 0.537246 | 6 | 0 | 3 |
| SNX22 | FGD2 | 0.534155 | 3 | 0 | 3 |
| SNX22 | ESPNL | 0.529961 | 6 | 0 | 4 |
| SNX22 | SSTR3 | 0.526396 | 5 | 0 | 3 |
| SNX22 | CD40LG | 0.525659 | 3 | 0 | 3 |
| SNX22 | OR1F1 | 0.520572 | 4 | 0 | 3 |
For details and further investigation, click here
