| Full name: long intergenic non-protein coding RNA 1169 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 15q22.31 | ||
| Entrez ID: 102723165 | HGNC ID: HGNC:49541 | Ensembl Gene: ENSG00000259471 | OMIM ID: |
Expression of LINC01169:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01169 | 102723165 | 1563132_at | 0.0485 | 0.8706 | |
| GSE26886 | LINC01169 | 102723165 | 1563132_at | 0.2383 | 0.0132 | |
| GSE45670 | LINC01169 | 102723165 | 1563132_at | 0.0379 | 0.6841 | |
| GSE63941 | LINC01169 | 102723165 | 1563132_at | -0.1530 | 0.2811 | |
| GSE77861 | LINC01169 | 102723165 | 1563132_at | -0.1788 | 0.1737 | |
| SRP133303 | LINC01169 | 102723165 | RNAseq | 0.1118 | 0.6933 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of LINC01169:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01169 | 102723165 | 7 | 3 | 20 | |
| GSE20123 | LINC01169 | 102723165 | 7 | 3 | 20 | |
| GSE43470 | LINC01169 | 102723165 | 4 | 6 | 33 | |
| GSE46452 | LINC01169 | 102723165 | 3 | 7 | 49 | |
| GSE47630 | LINC01169 | 102723165 | 8 | 10 | 22 | |
| GSE54993 | LINC01169 | 102723165 | 5 | 6 | 59 | |
| GSE54994 | LINC01169 | 102723165 | 6 | 7 | 40 | |
| GSE60625 | LINC01169 | 102723165 | 4 | 0 | 7 | |
| GSE74703 | LINC01169 | 102723165 | 4 | 3 | 29 | |
| GSE74704 | LINC01169 | 102723165 | 3 | 3 | 14 |
Total number of gains: 51; Total number of losses: 48; Total Number of normals: 293.
Somatic mutations of LINC01169:
Generating mutation plots.
Highly correlated genes for LINC01169:
Showing top 20/47 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01169 | EFCAB13 | 0.684006 | 3 | 0 | 3 |
| LINC01169 | ODF3B | 0.673834 | 3 | 0 | 3 |
| LINC01169 | SIGLEC7 | 0.663495 | 3 | 0 | 3 |
| LINC01169 | FLT3LG | 0.662102 | 3 | 0 | 3 |
| LINC01169 | BTBD17 | 0.660386 | 3 | 0 | 3 |
| LINC01169 | FBN3 | 0.64007 | 3 | 0 | 3 |
| LINC01169 | HTR5A | 0.637899 | 3 | 0 | 3 |
| LINC01169 | S1PR4 | 0.629484 | 3 | 0 | 3 |
| LINC01169 | CPNE7 | 0.629453 | 4 | 0 | 4 |
| LINC01169 | PTP4A3 | 0.618408 | 4 | 0 | 3 |
| LINC01169 | TMEM179 | 0.615444 | 4 | 0 | 3 |
| LINC01169 | KCTD17 | 0.613999 | 3 | 0 | 3 |
| LINC01169 | ISYNA1 | 0.610593 | 3 | 0 | 3 |
| LINC01169 | LIMD2 | 0.609514 | 3 | 0 | 3 |
| LINC01169 | RHPN1 | 0.608774 | 3 | 0 | 3 |
| LINC01169 | MAST2 | 0.604383 | 3 | 0 | 3 |
| LINC01169 | ADRA2C | 0.602408 | 3 | 0 | 3 |
| LINC01169 | EBF4 | 0.600464 | 3 | 0 | 3 |
| LINC01169 | BRF1 | 0.592161 | 3 | 0 | 3 |
| LINC01169 | APC2 | 0.590863 | 4 | 0 | 4 |
For details and further investigation, click here
