TCTEX1D4

 

Full name: Tctex1 domain containing 4 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p34.1
Entrez ID: 343521 HGNC ID: HGNC:32315 Ensembl Gene: ENSG00000188396 OMIM ID: 611713
Drug and gene relationship at DGIdb

 

Expression of TCTEX1D4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 TCTEX1D4 343521 2118 -0.1630 0.2816
GSE53624 TCTEX1D4 343521 2118 -0.3772 0.0007
GSE97050 TCTEX1D4 343521 A_33_P3375185 0.1592 0.5096
SRP133303 TCTEX1D4 343521 RNAseq -0.9235 0.0160
SRP219564 TCTEX1D4 343521 RNAseq -0.3723 0.5193
TCGA TCTEX1D4 343521 RNAseq -0.7143 0.0097

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by TCTEX1D4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of TCTEX1D4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TCTEX1D4 343521 4 3 23
GSE20123 TCTEX1D4 343521 4 2 24
GSE43470 TCTEX1D4 343521 7 2 34
GSE46452 TCTEX1D4 343521 2 1 56
GSE47630 TCTEX1D4 343521 9 3 28
GSE54993 TCTEX1D4 343521 0 1 69
GSE54994 TCTEX1D4 343521 13 2 38
GSE60625 TCTEX1D4 343521 0 0 11
GSE74703 TCTEX1D4 343521 6 1 29
GSE74704 TCTEX1D4 343521 2 0 18
TCGA TCTEX1D4 343521 13 16 67

Total number of gains: 60; Total number of losses: 31; Total Number of normals: 397.  

 

Somatic mutations of TCTEX1D4:

 

Generating mutation plots.

 

Highly correlated genes for TCTEX1D4:

 

Showing all 13 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TCTEX1D4CTSE0.726189303
TCTEX1D4HGD0.708076403
TCTEX1D4NEUROG10.693828303
TCTEX1D4FGF220.690336303
TCTEX1D4HHATL0.666821403
TCTEX1D4RUFY40.657516303
TCTEX1D4PHF21B0.621504403
TCTEX1D4DEFB108B0.620933303
TCTEX1D4PVALB0.619676403
TCTEX1D4LHX90.610498403
TCTEX1D4CSHL10.607184403
TCTEX1D4IL1F100.595205403
TCTEX1D4GPSM10.511518403

For details and further investigation, click here