| Full name: LIM homeobox 9 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1q31.3 | ||
| Entrez ID: 56956 | HGNC ID: HGNC:14222 | Ensembl Gene: ENSG00000143355 | OMIM ID: 606066 |
| Drug and gene relationship at DGIdb | |||
Expression of LHX9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LHX9 | 56956 | 1565407_at | 0.1102 | 0.6682 | |
| GSE26886 | LHX9 | 56956 | 1565406_a_at | -0.0244 | 0.8341 | |
| GSE45670 | LHX9 | 56956 | 1565406_a_at | -0.1367 | 0.1882 | |
| GSE53622 | LHX9 | 56956 | 78566 | -0.0926 | 0.1222 | |
| GSE53624 | LHX9 | 56956 | 78566 | 0.0417 | 0.6312 | |
| GSE63941 | LHX9 | 56956 | 1565406_a_at | 0.0513 | 0.8570 | |
| GSE77861 | LHX9 | 56956 | 1565407_at | -0.1006 | 0.2361 | |
| GSE97050 | LHX9 | 56956 | A_33_P3365441 | 0.0912 | 0.7168 | |
| TCGA | LHX9 | 56956 | RNAseq | 4.7837 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by LHX9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LHX9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LHX9 | 56956 | 6 | 0 | 24 | |
| GSE20123 | LHX9 | 56956 | 6 | 0 | 24 | |
| GSE43470 | LHX9 | 56956 | 7 | 0 | 36 | |
| GSE46452 | LHX9 | 56956 | 3 | 1 | 55 | |
| GSE47630 | LHX9 | 56956 | 14 | 0 | 26 | |
| GSE54993 | LHX9 | 56956 | 0 | 6 | 64 | |
| GSE54994 | LHX9 | 56956 | 16 | 0 | 37 | |
| GSE60625 | LHX9 | 56956 | 0 | 0 | 11 | |
| GSE74703 | LHX9 | 56956 | 7 | 0 | 29 | |
| GSE74704 | LHX9 | 56956 | 1 | 0 | 19 | |
| TCGA | LHX9 | 56956 | 41 | 6 | 49 |
Total number of gains: 101; Total number of losses: 13; Total Number of normals: 374.
Somatic mutations of LHX9:
Generating mutation plots.
Highly correlated genes for LHX9:
Showing top 20/402 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LHX9 | FOXB1 | 0.814342 | 3 | 0 | 3 |
| LHX9 | PTAFR | 0.809505 | 3 | 0 | 3 |
| LHX9 | MMP17 | 0.807835 | 3 | 0 | 3 |
| LHX9 | PLA2G2C | 0.801807 | 3 | 0 | 3 |
| LHX9 | TTC12 | 0.784771 | 3 | 0 | 3 |
| LHX9 | CNOT3 | 0.782623 | 3 | 0 | 3 |
| LHX9 | SAMD4A | 0.776208 | 3 | 0 | 3 |
| LHX9 | ZNF497 | 0.77434 | 3 | 0 | 3 |
| LHX9 | TEX13A | 0.771423 | 3 | 0 | 3 |
| LHX9 | DCDC1 | 0.76354 | 3 | 0 | 3 |
| LHX9 | TSPAN10 | 0.760023 | 3 | 0 | 3 |
| LHX9 | KIF21B | 0.75656 | 3 | 0 | 3 |
| LHX9 | GRIK4 | 0.754802 | 4 | 0 | 4 |
| LHX9 | OPRD1 | 0.754301 | 3 | 0 | 3 |
| LHX9 | KCTD19 | 0.753843 | 3 | 0 | 3 |
| LHX9 | TMEM184A | 0.75353 | 4 | 0 | 4 |
| LHX9 | ZNF329 | 0.75204 | 3 | 0 | 3 |
| LHX9 | PRLH | 0.751964 | 4 | 0 | 4 |
| LHX9 | TOR2A | 0.748991 | 3 | 0 | 3 |
| LHX9 | C2CD4D | 0.747668 | 3 | 0 | 3 |
For details and further investigation, click here
