| Full name: TRIM52 antisense RNA 1 (head to head) | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 5q35.3 | ||
| Entrez ID: 100507602 | HGNC ID: HGNC:49006 | Ensembl Gene: ENSG00000248275 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TRIM52-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRIM52-AS1 | 100507602 | 228664_at | -0.1734 | 0.8426 | |
| GSE26886 | TRIM52-AS1 | 100507602 | 228664_at | 0.8702 | 0.0000 | |
| GSE45670 | TRIM52-AS1 | 100507602 | 228664_at | -0.4230 | 0.0018 | |
| GSE53622 | TRIM52-AS1 | 100507602 | 36371 | -0.2373 | 0.1585 | |
| GSE53624 | TRIM52-AS1 | 100507602 | 36371 | 0.0132 | 0.9313 | |
| GSE63941 | TRIM52-AS1 | 100507602 | 228664_at | 0.5047 | 0.3338 | |
| GSE77861 | TRIM52-AS1 | 100507602 | 228664_at | 0.1385 | 0.4236 | |
| SRP007169 | TRIM52-AS1 | 100507602 | RNAseq | 0.0417 | 0.9515 | |
| SRP064894 | TRIM52-AS1 | 100507602 | RNAseq | 0.0812 | 0.7890 | |
| SRP133303 | TRIM52-AS1 | 100507602 | RNAseq | -0.2814 | 0.0901 | |
| SRP159526 | TRIM52-AS1 | 100507602 | RNAseq | 0.1278 | 0.6885 | |
| SRP193095 | TRIM52-AS1 | 100507602 | RNAseq | 0.0459 | 0.6476 | |
| SRP219564 | TRIM52-AS1 | 100507602 | RNAseq | -0.2335 | 0.6948 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TRIM52-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TRIM52-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRIM52-AS1 | 100507602 | 2 | 13 | 15 | |
| GSE20123 | TRIM52-AS1 | 100507602 | 2 | 13 | 15 | |
| GSE43470 | TRIM52-AS1 | 100507602 | 1 | 10 | 32 | |
| GSE46452 | TRIM52-AS1 | 100507602 | 0 | 27 | 32 | |
| GSE47630 | TRIM52-AS1 | 100507602 | 2 | 20 | 18 | |
| GSE54993 | TRIM52-AS1 | 100507602 | 10 | 2 | 58 | |
| GSE54994 | TRIM52-AS1 | 100507602 | 3 | 19 | 31 | |
| GSE60625 | TRIM52-AS1 | 100507602 | 1 | 0 | 10 | |
| GSE74703 | TRIM52-AS1 | 100507602 | 1 | 6 | 29 | |
| GSE74704 | TRIM52-AS1 | 100507602 | 1 | 6 | 13 |
Total number of gains: 23; Total number of losses: 116; Total Number of normals: 253.
Somatic mutations of TRIM52-AS1:
Generating mutation plots.
Highly correlated genes for TRIM52-AS1:
Showing top 20/167 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRIM52-AS1 | ASMTL | 0.703029 | 4 | 0 | 4 |
| TRIM52-AS1 | YPEL1 | 0.695032 | 3 | 0 | 3 |
| TRIM52-AS1 | PLCL1 | 0.679468 | 5 | 0 | 5 |
| TRIM52-AS1 | ZSCAN21 | 0.677535 | 3 | 0 | 3 |
| TRIM52-AS1 | PBXIP1 | 0.666482 | 4 | 0 | 4 |
| TRIM52-AS1 | TMEM178A | 0.659174 | 3 | 0 | 3 |
| TRIM52-AS1 | NCKIPSD | 0.656779 | 3 | 0 | 3 |
| TRIM52-AS1 | ZNF511 | 0.656265 | 3 | 0 | 3 |
| TRIM52-AS1 | TCEAL3 | 0.651376 | 3 | 0 | 3 |
| TRIM52-AS1 | ENO2 | 0.644664 | 3 | 0 | 3 |
| TRIM52-AS1 | LDLRAD4 | 0.641774 | 3 | 0 | 3 |
| TRIM52-AS1 | PDE9A | 0.639479 | 4 | 0 | 3 |
| TRIM52-AS1 | GPC4 | 0.637592 | 5 | 0 | 3 |
| TRIM52-AS1 | NBEA | 0.637249 | 3 | 0 | 3 |
| TRIM52-AS1 | WFS1 | 0.634504 | 5 | 0 | 3 |
| TRIM52-AS1 | PDS5B | 0.634278 | 3 | 0 | 3 |
| TRIM52-AS1 | A2M-AS1 | 0.634268 | 4 | 0 | 3 |
| TRIM52-AS1 | EDRF1 | 0.628751 | 3 | 0 | 3 |
| TRIM52-AS1 | PRKAB2 | 0.627428 | 3 | 0 | 3 |
| TRIM52-AS1 | R3HCC1 | 0.625795 | 5 | 0 | 3 |
For details and further investigation, click here
